RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 PRKAA2P54646 552 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 ITGA1P56199 1179 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 VSX2P58304 361 aaPredicted RBP24.27■■□□□ 1.48
U2AF1-203ENST00000398137 HERVK_113P63132 956 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 REEP5Q00765 189 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 DEFB109BQ30KR1 87 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 PRAMEF9Q5VWM5 478 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 RPS27LQ71UM5 84 aaKnown RBP24.27■■□□□ 1.48
U2AF1-203ENST00000398137 PRICKLE2Q7Z3G6 844 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 SLC22A9Q8IVM8 553 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 OR4N4Q8N0Y3 316 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 SLC38A9Q8NBW4 561 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 OR4K1Q8NGD4 311 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 OR8K5Q8NH50 307 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 CT55Q8WUE5 264 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 ARL8AQ96BM9 186 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 TLCD1Q96CP7 247 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 ERVK-6Q9BXR3 956 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 CAPS2Q9BXY5 557 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 SSU72Q9NP77 194 aaKnown RBP24.27■■□□□ 1.48
U2AF1-203ENST00000398137 MID2Q9UJV3 735 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 PCDHGA6Q9Y5G7 932 aa24.27■■□□□ 1.48
U2AF1-203ENST00000398137 OR2B3O76000 313 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 NTRK1P04629 796 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 C1GALT1C1LP0DN25 315 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 GRK3P35626 688 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 BCL6P41182 706 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 PIK3CGP48736 1102 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 SLBPQ14493 270 aaKnown RBP eCLIP24.26■■□□□ 1.47
U2AF1-203ENST00000398137 XKR6Q5GH73 641 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 PRAMEF17Q5VTA0 474 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 ATG9BQ674R7 924 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 METTL2BQ6P1Q9 378 aaKnown RBP24.26■■□□□ 1.47
U2AF1-203ENST00000398137 ZNF740Q8NDX6 193 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 AIF1LQ9BQI0 150 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 FAM117AQ9C073 453 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 SPRTNQ9H040 489 aaPredicted RBP24.26■■□□□ 1.47
U2AF1-203ENST00000398137 COPG2Q9UBF2 871 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 SERTAD3Q9UJW9 196 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 PADI1Q9ULC6 663 aa24.26■■□□□ 1.47
U2AF1-203ENST00000398137 SPENQ96T58 3664 aaKnown RBP24.26■■□□□ 1.47
U2AF1-203ENST00000398137 H0YGG7 62 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 STATHP02808 62 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 ARF3P61204 181 aaPredicted RBP24.25■■□□□ 1.47
U2AF1-203ENST00000398137 MAGOHP61326 146 aaKnown RBP24.25■■□□□ 1.47
U2AF1-203ENST00000398137 RPS15AP62244 130 aaKnown RBP24.25■■□□□ 1.47
U2AF1-203ENST00000398137 IRF8Q02556 426 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 RELAQ04206 551 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 CHIT1Q13231 466 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 DNASE1L3Q13609 305 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 PCLAFQ15004 111 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 AGBL2Q5U5Z8 902 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 FAM199XQ6PEV8 388 aaPredicted RBP24.25■■□□□ 1.47
U2AF1-203ENST00000398137 BPHLQ86WA6 291 aaPredicted RBP24.25■■□□□ 1.47
U2AF1-203ENST00000398137 TMEM126BQ8IUX1 230 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 GPR135Q8IZ08 494 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 ZNF483Q8TF39 744 aaPredicted RBP24.25■■□□□ 1.47
U2AF1-203ENST00000398137 CCDC126Q96EE4 140 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 OR2A5Q96R48 311 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 KCNK9Q9NPC2 374 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 TUBD1Q9UJT1 453 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 SPTA1P02549 2419 aa24.25■■□□□ 1.47
U2AF1-203ENST00000398137 TRBC2A0A5B9 178 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 EIF2S1P05198 315 aaKnown RBP24.24■■□□□ 1.47
U2AF1-203ENST00000398137 CD22P20273 847 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 MC1RQ01726 317 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 DOC2AQ14183 400 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 ERV3-1Q14264 604 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 UNC50Q53HI1 259 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 ZNF678Q5SXM1 525 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 ZNF517Q6ZMY9 492 aaPredicted RBP24.24■■□□□ 1.47
U2AF1-203ENST00000398137 PPP4R1Q8TF05 950 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 RERGQ96A58 199 aaPredicted RBP24.24■■□□□ 1.47
U2AF1-203ENST00000398137 L3HYPDHQ96EM0 354 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 MOCOSQ96EN8 888 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 SH3GL2Q99962 352 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 C1QTNF3Q9BXJ4 246 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 TRIM4Q9C037 500 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 EHD1Q9H4M9 534 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 IPPKQ9H8X2 491 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 SEMA4BQ9NPR2 832 aaPredicted RBP24.24■■□□□ 1.47
U2AF1-203ENST00000398137 KCNMB2Q9Y691 235 aa24.24■■□□□ 1.47
U2AF1-203ENST00000398137 H3BMH7 237 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 ZSCAN9O15535 394 aaPredicted RBP24.23■■□□□ 1.47
U2AF1-203ENST00000398137 OR1F1O43749 312 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 LCMT2O60294 686 aaKnown RBP24.23■■□□□ 1.47
U2AF1-203ENST00000398137 H2AFYO75367 372 aaKnown RBP24.23■■□□□ 1.47
U2AF1-203ENST00000398137 KATNA1O75449 491 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 SCRG1O75711 98 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 TSPAN8P19075 237 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 IMPDH1P20839 514 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 ARL1P40616 181 aaPredicted RBP24.23■■□□□ 1.47
U2AF1-203ENST00000398137 GPS2Q13227 327 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 WASHC2DQ5SRD0 308 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 MYLK4Q86YV6 388 aaPredicted RBP24.23■■□□□ 1.47
U2AF1-203ENST00000398137 C10orf107Q8IVU9 208 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 TBC1D19Q8N5T2 526 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 ZNF655Q8N720 491 aaPredicted RBP24.23■■□□□ 1.47
U2AF1-203ENST00000398137 CCNYL1Q8N7R7 359 aa24.23■■□□□ 1.47
U2AF1-203ENST00000398137 GOLGA6L1Q8N7Z2 621 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms