RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 FAM72DQ6L9T8 149 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 QSOX2Q6ZRP7 698 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 HMGN2P46Q86SG4 172 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 FAM72BQ86X60 149 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 CILP2Q8IUL8 1156 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 TSPAN6O43657 245 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 MAGEA11P43364 429 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 AP1S2P56377 157 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 OGDHQ02218 1023 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 CCDC116Q8IYX3 515 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 APCDD1Q8J025 514 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 TRPV5Q9NQA5 729 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 OXSMQ9NWU1 459 aa11.01□□□□□ -0.65
TTC28-201ENST00000397906 SPIN1Q9Y657 262 aaPredicted RBP11.01□□□□□ -0.65
TTC28-201ENST00000397906 K7ERQ8 282 aa11□□□□□ -0.65
TTC28-201ENST00000397906 C6orf47O95873 294 aa11□□□□□ -0.65
TTC28-201ENST00000397906 NAT8LQ8N9F0 302 aa11□□□□□ -0.65
TTC28-201ENST00000397906 GNG8Q9UK08 70 aa11□□□□□ -0.65
TTC28-201ENST00000397906 E7EQ34 232 aa11□□□□□ -0.65
TTC28-201ENST00000397906 ZNF16P17020 682 aaPredicted RBP11□□□□□ -0.65
TTC28-201ENST00000397906 PAX7P23759 505 aa11□□□□□ -0.65
TTC28-201ENST00000397906 OGFOD2Q6N063 350 aa11□□□□□ -0.65
TTC28-201ENST00000397906 SLC30A8Q8IWU4 369 aa11□□□□□ -0.65
TTC28-201ENST00000397906 CNTD1Q8N815 330 aa11□□□□□ -0.65
TTC28-201ENST00000397906 ZNF347Q96SE7 839 aa11□□□□□ -0.65
TTC28-201ENST00000397906 CMKLR1Q99788 373 aa11□□□□□ -0.65
TTC28-201ENST00000397906 DOT1LQ8TEK3 1739 aa11□□□□□ -0.65
TTC28-201ENST00000397906 FAM208AQ9UK61 1670 aaKnown RBP11□□□□□ -0.65
TTC28-201ENST00000397906 NPIPA2E9PIF3 369 aa11□□□□□ -0.65
TTC28-201ENST00000397906 NPIPA3F8WFD2 350 aa11□□□□□ -0.65
TTC28-201ENST00000397906 EPCAMP16422 314 aa11□□□□□ -0.65
TTC28-201ENST00000397906 SHMT2P34897 504 aa11□□□□□ -0.65
TTC28-201ENST00000397906 MLLT10P55197 1068 aa11□□□□□ -0.65
TTC28-201ENST00000397906 CRTC2Q53ET0 693 aaPredicted RBP11□□□□□ -0.65
TTC28-201ENST00000397906 ZNF613Q6PF04 617 aa11□□□□□ -0.65
TTC28-201ENST00000397906 MAN2B2Q9Y2E5 1009 aa11□□□□□ -0.65
TTC28-201ENST00000397906 HCRTR2O43614 444 aa11□□□□□ -0.65
TTC28-201ENST00000397906 RAET1LQ5VY80 246 aa11□□□□□ -0.65
TTC28-201ENST00000397906 TMEM225Q6GV28 225 aa11□□□□□ -0.65
TTC28-201ENST00000397906 UBAP1Q9NZ09 502 aa11□□□□□ -0.65
TTC28-201ENST00000397906 WBP11Q9Y2W2 641 aaKnown RBP11□□□□□ -0.65
TTC28-201ENST00000397906 S100ZQ8WXG8 99 aa11□□□□□ -0.65
TTC28-201ENST00000397906 UFD1Q92890 307 aa11□□□□□ -0.65
TTC28-201ENST00000397906 TUBGCP5Q96RT8 1024 aa11□□□□□ -0.65
TTC28-201ENST00000397906 PCDHAC1Q9H158 963 aa11□□□□□ -0.65
TTC28-201ENST00000397906 SH3BGRL2Q9UJC5 107 aa11□□□□□ -0.65
TTC28-201ENST00000397906 STOML2Q9UJZ1 356 aa11□□□□□ -0.65
TTC28-201ENST00000397906 COQ4Q9Y3A0 265 aa11□□□□□ -0.65
TTC28-201ENST00000397906 SOX14O95416 240 aa11□□□□□ -0.65
TTC28-201ENST00000397906 FLYWCH1Q4VC44 716 aa11□□□□□ -0.65
TTC28-201ENST00000397906 ZDHHC2Q9UIJ5 367 aa11□□□□□ -0.65
TTC28-201ENST00000397906 KNDC1Q76NI1 1749 aa11□□□□□ -0.65
TTC28-201ENST00000397906 OXTRP30559 389 aa11□□□□□ -0.65
TTC28-201ENST00000397906 SLC2A7Q6PXP3 512 aa11□□□□□ -0.65
TTC28-201ENST00000397906 OR2B3O76000 313 aa11□□□□□ -0.65
TTC28-201ENST00000397906 BMP8BP34820 402 aa11□□□□□ -0.65
TTC28-201ENST00000397906 NPY5RQ15761 445 aa11□□□□□ -0.65
TTC28-201ENST00000397906 CST6Q15828 149 aa11□□□□□ -0.65
TTC28-201ENST00000397906 SLC9A4Q6AI14 798 aa11□□□□□ -0.65
TTC28-201ENST00000397906 BMP8AQ7Z5Y6 402 aa11□□□□□ -0.65
TTC28-201ENST00000397906 RNF130Q86XS8 419 aa11□□□□□ -0.65
TTC28-201ENST00000397906 RAB8BQ92930 207 aa11□□□□□ -0.65
TTC28-201ENST00000397906 TMEM203Q969S6 136 aa11□□□□□ -0.65
TTC28-201ENST00000397906 TMED9Q9BVK6 235 aa11□□□□□ -0.65
TTC28-201ENST00000397906 ADAMTS10Q9H324 1103 aa11□□□□□ -0.65
TTC28-201ENST00000397906 KCND1Q9NSA2 647 aa11□□□□□ -0.65
TTC28-201ENST00000397906 LYARQ9NX58 379 aaKnown RBP11□□□□□ -0.65
TTC28-201ENST00000397906 RHCGQ9UBD6 479 aa11□□□□□ -0.65
TTC28-201ENST00000397906 TELO2Q9Y4R8 837 aa11□□□□□ -0.65
TTC28-201ENST00000397906 MANBAO00462 879 aa11□□□□□ -0.65
TTC28-201ENST00000397906 PSMD7P51665 324 aa11□□□□□ -0.65
TTC28-201ENST00000397906 JAGN1Q8N5M9 183 aa11□□□□□ -0.65
TTC28-201ENST00000397906 PEBP4Q96S96 227 aa11□□□□□ -0.65
TTC28-201ENST00000397906 SMURF1Q9HCE7 757 aa11□□□□□ -0.65
TTC28-201ENST00000397906 TAS2R9Q9NYW1 312 aa11□□□□□ -0.65
TTC28-201ENST00000397906 ZFR2Q9UPR6 939 aaKnown RBP11□□□□□ -0.65
TTC28-201ENST00000397906 ZNF878C9JN71 531 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 SEC14L5O43304 696 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 DIRAS1O95057 198 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 HOXB6P17509 224 aaKnown RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 C5orf22Q49AR2 442 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 BANPQ8N9N5 519 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 TM9SF2Q99805 663 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 DEFB126Q9BYW3 111 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 CD207Q9UJ71 328 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 FIP1L1Q6UN15 594 aaKnown RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 VNN3Q9NY84 501 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 UPB1Q9UBR1 384 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 PCDHGB7Q9Y5F8 929 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 SEMA4FO95754 770 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 SCGB1D2O95969 90 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 RPL5P46777 297 aaKnown RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 OR3A3P47888 321 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 OR3A2P47893 321 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 DCTN2Q13561 401 aaKnown RBP10.99□□□□□ -0.65
TTC28-201ENST00000397906 TICAM1Q8IUC6 712 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 SIAH1Q8IUQ4 282 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 TMEM151BQ8IW70 566 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 OR2L8Q8NGY9 312 aa10.99□□□□□ -0.65
TTC28-201ENST00000397906 HAVCR1Q96D42 359 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms