RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 UFM1P61960 85 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 RAE1P78406 368 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 ACSM2AQ08AH3 577 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 RCAN2Q14206 197 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 DEPDC1Q5TB30 811 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 ACSM2BQ68CK6 577 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 FCRL6Q6DN72 434 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 ZCCHC8Q6NZY4 707 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 GK5Q6ZS86 529 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 TRIM73Q86UV7 250 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 PLD3Q8IV08 490 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 METTL4Q8N3J2 472 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 LIX1Q8N485 282 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 OR4C6Q8NH72 309 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 FAM122AQ96E09 287 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 TEX37Q96LM6 180 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 APOLD1Q96LR9 279 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 SLC38A3Q99624 504 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 RTKNQ9BST9 563 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 SLC25A23Q9BV35 468 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 GAREM1Q9H706 876 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 IL21RQ9HBE5 538 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 FSCN3Q9NQT6 498 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 TAS2R1Q9NYW7 299 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 PILRAQ9UKJ1 303 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 KLHL20Q9Y2M5 609 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 RNF215Q9Y6U7 377 aa18.65■□□□□ 0.58
PDLIM2-205ENST00000397761 DNAJC8O75937 253 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 CER1O95813 267 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 TGFB1P01137 390 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 PROS1P07225 676 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 SNRPB2P08579 225 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 HOXB3P14651 431 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 GLB1P16278 677 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 TYRP1P17643 537 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 GPR3P46089 330 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 CPA2P48052 419 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 CCT8P50990 548 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 C21orf58P58505 322 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 RPS15AP62244 130 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 ACTN3Q08043 901 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 PTGR1Q14914 329 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 ADPRMQ3LIE5 342 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 KHDRBS2Q5VWX1 349 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 FIGLAQ6QHK4 219 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 FBXO27Q8NI29 283 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 BAHD1Q8TBE0 780 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 ABCG4Q9H172 646 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 OR51B5Q9H339 312 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 EPB41L1Q9H4G0 881 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 SYNPO2LQ9H987 977 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 EPHA6Q9UF33 1036 aa18.64■□□□□ 0.57
PDLIM2-205ENST00000397761 FAM234BA2RU67 622 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 RHPN2P1A8MT19 583 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 B2RBV5 119 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 ZW10O43264 779 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 SYPP08247 313 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 IL12AP29459 219 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 TIA1P31483 386 aaKnown RBP eCLIP18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 CPOXP36551 454 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 ARFIP1P53367 373 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 CLDN8P56748 225 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 PPP1CAP62136 330 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 HYAL2Q12891 473 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 STX5Q13190 355 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 ARMC6Q6NXE6 501 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 FBXO42Q6P3S6 717 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 RINLQ6ZS11 566 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 GATAD2AQ86YP4 633 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 C1orf52Q8N6N3 182 aaKnown RBP18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 FAM181AQ8N9Y4 354 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 TRPV3Q8NET8 790 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 KLHL29Q96CT2 875 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 THAP11Q96EK4 314 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 TMEM74Q96NL1 305 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 BTBD10Q9BSF8 475 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 ZNF717Q9BY31 904 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 SEMA6CQ9H3T2 930 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 LRIT1Q9P2V4 623 aa18.63■□□□□ 0.57
PDLIM2-205ENST00000397761 GPR179Q6PRD1 2367 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 FRYLO94915 3013 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 DYTNA2CJ06 578 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 TRIM38O00635 465 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 PCDHGA12O60330 932 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 CTSVO60911 334 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 ALPPL2P10696 532 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 TACR1P25103 407 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 MPLP40238 635 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 NME5P56597 212 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 BIRC2Q13490 618 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 LPAL2Q16609 132 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 COQ5Q5HYK3 327 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 PLA2G2CQ5R387 149 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 COMMD6Q7Z4G1 85 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 VN1R4Q7Z5H5 301 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 RIMKLAQ8IXN7 391 aa18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 GLB1L3Q8NCI6 653 aaPredicted RBP18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 RBM15BQ8NDT2 890 aaKnown RBP18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.62■□□□□ 0.57
PDLIM2-205ENST00000397761 TM4SF19Q96DZ7 209 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms