RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SHMT2P34897 504 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 CASP2P42575 452 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 KRT6CP48668 564 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 NR1H2P55055 460 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 MAP7Q14244 749 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 SGO1Q5FBB7 561 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 CATSPEREQ5SY80 951 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 SLC9B2Q86UD5 537 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 SATL1Q86VE3 508 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 SYT12Q8IV01 421 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 ZBTB44Q8NCP5 570 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 SLCO4A1Q96BD0 722 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 CNBD2Q96M20 576 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 SNX6Q9UNH7 406 aa18.58■□□□□ 0.57
PDLIM2-204ENST00000397760 C1GALT1C1LP0DN25 315 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 PSMB5P28074 263 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 HNF4AP41235 474 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 SLC7A2P52569 658 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 BNC1Q01954 994 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 SIM2Q14190 667 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 GPR18Q14330 331 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 XKR7Q5GH72 579 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 ATG9BQ674R7 924 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 GRHL2Q6ISB3 625 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 C17orf64Q86WR6 236 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 SDR16C5Q8N3Y7 309 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 TUBGCP3Q96CW5 907 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 MTFMTQ96DP5 389 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 HBEGFQ99075 208 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 ELOVL6Q9H5J4 265 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 FARSBQ9NSD9 589 aaKnown RBP18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 CCM2LQ9NUG4 571 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 OR6C2Q9NZP2 312 aa18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 ZNF490Q9ULM2 529 aaPredicted RBP18.58■□□□□ 0.56
PDLIM2-204ENST00000397760 LMO7DNF2Z398 122 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 HNRNPRO43390 633 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 CDH1P12830 882 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 E2F2Q14209 437 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 PLCL1Q15111 1095 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 C6orf52Q5T4I8 152 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 NXPE4Q6UWF7 544 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 GALNT4Q8N4A0 578 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 LRTOMTQ8WZ04 291 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 USP7Q93009 1102 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 DTNBP1Q96EV8 351 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 WDR34Q96EX3 536 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 SRMSQ9H3Y6 488 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 EHD1Q9H4M9 534 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 UCKL1Q9NWZ5 548 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 PCDHB11Q9Y5F2 797 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 SPAG17Q6Q759 2223 aa18.57■□□□□ 0.56
PDLIM2-204ENST00000397760 ARHGAP10A1A4S6 786 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 FAM86C2PA6NEL3 165 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 ANGPT2O15123 496 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 ANXA6P08133 673 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 PRR35P0CG20 571 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 YBX1P67809 324 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 INTS11Q5TA45 600 aaKnown RBP18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 AP1ARQ63HQ0 302 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 LCN8Q6JVE9 175 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 PPP4R4Q6NUP7 873 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 RNF165Q6ZSG1 346 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 ERMP1Q7Z2K6 904 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 OR9I1Q8NGQ6 314 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 OR2T11Q8NH01 316 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 SELENOMQ8WWX9 145 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 SLC45A3Q96JT2 553 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 ELF4Q99607 663 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 EFCAB11Q9BUY7 163 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 COQ10BQ9H8M1 238 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 RIC8BQ9NVN3 520 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 MAP10Q9P2G4 905 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 PGM3O95394 542 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 PDYNP01213 254 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 NEK2P51955 445 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 ATXN3P54252 364 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 HHEXQ03014 270 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 DEFB133Q30KQ1 61 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 PEAR1Q5VY43 1037 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 FRG2Q64ET8 278 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 PRR23BQ6ZRT6 265 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 Q6ZSR9 355 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 RETREG3Q86VR2 466 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 CARM1Q86X55 608 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 OR2A1Q8NGT9 310 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 FRG2BQ96QU4 278 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 SPHK1Q9NYA1 384 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 ACTR3BQ9P1U1 418 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 GIMAP2Q9UG22 337 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 PCDHGA2Q9Y5H1 932 aa18.56■□□□□ 0.56
PDLIM2-204ENST00000397760 KNL1Q8NG31 2342 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 H0YIV9 168 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 SLC28A1O00337 649 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 PRICKLE3O43900 615 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 NPPAP01160 153 aa18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 CHRM5P08912 532 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 ARRB1P49407 418 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 MAZP56270 477 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 PRDX1Q06830 199 aaKnown RBP18.55■□□□□ 0.56
PDLIM2-204ENST00000397760 BNIP3Q12983 259 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms