RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 EPXP11678 715 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 ETS1P14921 441 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 HRH2P25021 359 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 ADH6P28332 368 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 CD96P40200 585 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 PNLIPRP1P54315 467 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 SESN2P58004 480 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-208ENST00000397204 SNRPNP63162 240 aaKnown RBP8.27□□□□□ -1.09
CAPN3-208ENST00000397204 ADORA2A-AS1P86434 159 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 TAP2Q03519 686 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 PTK6Q13882 451 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 C3AR1Q16581 482 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 MEP1AQ16819 746 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 SYT16Q17RD7 645 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 CTSL3PQ5NE16 218 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 RNF187Q5TA31 235 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-208ENST00000397204 RAD9BQ6WBX8 426 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 NEK10Q6ZWH5 1172 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 PCGF5Q86SE9 256 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 KIAA1328Q86T90 577 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 ZC3H7AQ8IWR0 971 aaKnown RBP8.27□□□□□ -1.09
CAPN3-208ENST00000397204 HORMAD2Q8N7B1 307 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 CCDC89Q8N998 374 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 FBXO15Q8NCQ5 510 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-208ENST00000397204 M1APQ8TC57 530 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 MCOLN3Q8TDD5 553 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 LPGAT1Q92604 370 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 C14orf79Q96F83 325 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 GPR137Q96N19 417 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 PKP4Q99569 1192 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 UTP23Q9BRU9 249 aaKnown RBP8.27□□□□□ -1.09
CAPN3-208ENST00000397204 KIFC1Q9BW19 673 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 VN1R1Q9GZP7 353 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 EIF2B3Q9NR50 452 aaKnown RBP8.27□□□□□ -1.09
CAPN3-208ENST00000397204 KLHL42Q9P2K6 505 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 TAC3Q9UHF0 121 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 SH3BGRL2Q9UJC5 107 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 PACSIN2Q9UNF0 486 aaPredicted RBP8.27□□□□□ -1.09
CAPN3-208ENST00000397204 NUP210LQ5VU65 1888 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 NAV3Q8IVL0 2385 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 A0A0U1RQJ8 604 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ASPDHA6ND91 283 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ASNA1O43681 348 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ZBTB14O43829 449 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 NIPSNAP2O75323 286 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 SEC24DO94855 1032 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 NSA2O95478 260 aaKnown RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 SLC16A8O95907 504 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 NMBRP28336 390 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 EEF1DP29692 281 aaKnown RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 RPL22P35268 128 aaKnown RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 BCL6P41182 706 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 AGTR2P50052 363 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 CRADDP78560 199 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 MAT1AQ00266 395 aaKnown RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 CDK16Q00536 496 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ALDH6A1Q02252 535 aaKnown RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ACTN3Q08043 901 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 SNX1Q13596 522 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 TSTA3Q13630 321 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 TUBA3CQ13748 450 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 EXT1Q16394 746 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 CCNG2Q16589 344 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 TYSND1Q2T9J0 566 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 KLHL38Q2WGJ6 581 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 BTBD16Q32M84 506 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 TTLL9Q3SXZ7 439 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ACSBG2Q5FVE4 666 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ZNF468Q5VIY5 522 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ARMC3Q5W041 872 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 TUBA3EQ6PEY2 450 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 SLC13A5Q86YT5 568 aaPredicted RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 REXO1L1PQ8IX06 675 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 RNF10Q8N5U6 811 aaKnown RBP8.26□□□□□ -1.09
CAPN3-208ENST00000397204 OTUD6BQ8N6M0 293 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 TMEM178AQ8NBL3 297 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 MDS2Q8NDY4 140 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 PLPP5Q8NEB5 264 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ACRBPQ8NEB7 543 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 OR9A4Q8NGU2 314 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 OR51Q1Q8NH59 317 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ZNF480Q8WV37 535 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 C1orf54Q8WWF1 131 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ASB11Q8WXH4 323 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 MAGED4Q96JG8 741 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 FAM129AQ9BZQ8 928 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 TSGA10Q9BZW7 698 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 SYNPO2LQ9H987 977 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 KCNK13Q9HB14 408 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 TMEM184CQ9NVA4 438 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 GALPQ9UBC7 116 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 PCYOX1Q9UHG3 505 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 ITGB1BP2Q9UKP3 347 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 CRYL1Q9Y2S2 319 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 MEMO1Q9Y316 297 aa8.26□□□□□ -1.09
CAPN3-208ENST00000397204 IGHV3-20A0A0C4DH32 117 aa8.25□□□□□ -1.09
CAPN3-208ENST00000397204 MAGEB16A2A368 324 aa8.25□□□□□ -1.09
CAPN3-208ENST00000397204 E5RI56 91 aa8.25□□□□□ -1.09
CAPN3-208ENST00000397204 NPIPA5E9PKD4 350 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms