RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 WDR34Q96EX3 536 aa13.04□□□□□ -0.32
GAPDH-204ENST00000396859 SEC16BQ96JE7 1060 aa13.04□□□□□ -0.32
GAPDH-204ENST00000396859 FAM111AQ96PZ2 611 aa13.04□□□□□ -0.32
GAPDH-204ENST00000396859 C1QTNF3Q9BXJ4 246 aa13.04□□□□□ -0.32
GAPDH-204ENST00000396859 NOL11Q9H8H0 719 aaKnown RBP13.04□□□□□ -0.32
GAPDH-204ENST00000396859 VIPAS39Q9H9C1 493 aa13.04□□□□□ -0.32
GAPDH-204ENST00000396859 SSU72Q9NP77 194 aaKnown RBP13.04□□□□□ -0.32
GAPDH-204ENST00000396859 KCNK9Q9NPC2 374 aa13.04□□□□□ -0.32
GAPDH-204ENST00000396859 SEMA4BQ9NPR2 832 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-204ENST00000396859 LHX9Q9NQ69 397 aa13.04□□□□□ -0.32
GAPDH-204ENST00000396859 ENAMQ9NRM1 1142 aa13.04□□□□□ -0.32
GAPDH-204ENST00000396859 COPG2Q9UBF2 871 aa13.04□□□□□ -0.32
GAPDH-204ENST00000396859 DHCR7Q9UBM7 475 aaKnown RBP13.04□□□□□ -0.32
GAPDH-204ENST00000396859 GPN3Q9UHW5 284 aaPredicted RBP13.04□□□□□ -0.32
GAPDH-204ENST00000396859 G3V2L1 256 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 CLDN9O95484 217 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 MLYCDO95822 493 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 CTSBP07858 339 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 CD63P08962 238 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 PCNAP12004 261 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 EPORP19235 508 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 STAT5AP42229 794 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 STXBP1P61764 594 aaKnown RBP13.03□□□□□ -0.32
GAPDH-204ENST00000396859 CYP4F2P78329 520 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 GPS2Q13227 327 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 CLN3Q13286 438 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 TGIF1Q15583 401 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 PRMT9Q6P2P2 845 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 VN1R4Q7Z5H5 301 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 MILR1Q7Z6M3 343 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 EXOC3L1Q86VI1 746 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 ZNF483Q8TF39 744 aaPredicted RBP13.03□□□□□ -0.32
GAPDH-204ENST00000396859 TM4SF19Q96DZ7 209 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 L3HYPDHQ96EM0 354 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 MVB12AQ96EY5 273 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 CNTNAP3BQ96NU0 1288 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 TMEM237Q96Q45 408 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 CNTNAP3Q9BZ76 1288 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 SPNS1Q9H2V7 528 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 C12orf65Q9H3J6 166 aaKnown RBP13.03□□□□□ -0.32
GAPDH-204ENST00000396859 GPN2Q9H9Y4 310 aaPredicted RBP13.03□□□□□ -0.32
GAPDH-204ENST00000396859 TMBIM4Q9HC24 238 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 ADGRE2Q9UHX3 823 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 PCDHGA11Q9Y5H2 935 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 AKAP13Q12802 2813 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 SDK2Q58EX2 2172 aa13.03□□□□□ -0.32
GAPDH-204ENST00000396859 C21orf140B9A014 251 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 TM9SF1O15321 606 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 P2RX6O15547 441 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 TYROBPO43914 113 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 WFS1O76024 890 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 ZWINTO95229 277 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 STATHP02808 62 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 SERPINA6P08185 405 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 TCN2P20062 427 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 RORAP35398 523 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 DLSTP36957 453 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 AVPR1BP47901 424 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 UCNP55089 124 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 DNAJB13P59910 316 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 RPS15P62841 145 aaKnown RBP13.02□□□□□ -0.33
GAPDH-204ENST00000396859 CLCQ05315 142 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 TNFAIP8L3Q5GJ75 292 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 AGBL2Q5U5Z8 902 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 LIPMQ5VYY2 423 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 TTC19Q6DKK2 380 aaPredicted RBP13.02□□□□□ -0.33
GAPDH-204ENST00000396859 NIPAL1Q6NVV3 410 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 ABHD13Q7L211 337 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 SPACA3Q8IXA5 215 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.02□□□□□ -0.336e-8■■■■□ 20.7
GAPDH-204ENST00000396859 ANKRD53Q8N9V6 530 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 ZSCAN1Q8NBB4 408 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 SLC38A9Q8NBW4 561 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 ZCCHC10Q8TBK6 192 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 NT5CQ8TCD5 201 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 TRPC4APQ8TEL6 797 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 NSUN5Q96P11 429 aaKnown RBP13.02□□□□□ -0.33
GAPDH-204ENST00000396859 CCNL2Q96S94 520 aaPredicted RBP13.02□□□□□ -0.33
GAPDH-204ENST00000396859 NTMT1Q9BV86 223 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 FAM117AQ9C073 453 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 ANKHQ9HCJ1 492 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 ZNF304Q9HCX3 659 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 OXSMQ9NWU1 459 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 IFT80Q9P2H3 777 aaPredicted RBP13.02□□□□□ -0.33
GAPDH-204ENST00000396859 SLC17A7Q9P2U7 560 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 KCND3Q9UK17 655 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 ZMIZ1Q9ULJ6 1067 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 CEP295Q9C0D2 2601 aa13.02□□□□□ -0.33
GAPDH-204ENST00000396859 MDC1Q14676 2089 aaKnown RBP13.01□□□□□ -0.33
GAPDH-204ENST00000396859 A0A088AWK7 358 aa13.01□□□□□ -0.33
GAPDH-204ENST00000396859 H3BQF6 201 aa13.01□□□□□ -0.33
GAPDH-204ENST00000396859 OR7A17O14581 309 aa13.01□□□□□ -0.33
GAPDH-204ENST00000396859 PRAMEF4O60810 478 aa13.01□□□□□ -0.33
GAPDH-204ENST00000396859 TRIM13O60858 407 aa13.01□□□□□ -0.33
GAPDH-204ENST00000396859 CLEC3AO75596 197 aa13.01□□□□□ -0.33
GAPDH-204ENST00000396859 CREB1P16220 341 aa13.01□□□□□ -0.33
GAPDH-204ENST00000396859 CD22P20273 847 aa13.01□□□□□ -0.33
GAPDH-204ENST00000396859 ZNF10P21506 573 aaPredicted RBP13.01□□□□□ -0.33
GAPDH-204ENST00000396859 FBLP22087 321 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms