RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CLCN7P51798 805 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 EFNA3P52797 238 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 BASP1P80723 227 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 SRSF11Q05519 484 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 SNX1Q13596 522 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 RPS6KA1Q15418 735 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 LRRC8EQ6NSJ5 796 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 NEPROQ6NW34 567 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 PAPD4Q6PIY7 484 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 LRRC56Q8IYG6 542 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 CPAMD8Q8IZJ3 1885 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 MAIP1Q8WWC4 291 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 BAG1Q99933 345 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 TREX2Q9BQ50 279 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 TRIM51Q9BSJ1 452 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 CCDC177Q9NQR7 707 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 LRFN1Q9P244 771 aa16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 TSR3Q9UJK0 312 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-202ENST00000396521 IGHV3-20A0A0C4DH32 117 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 GABRR3A8MPY1 467 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 FOXO6A8MYZ6 492 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 SYF2O95926 243 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 CD1EP15812 388 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 ZNF24P17028 368 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 CCND1P24385 295 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 TLE4Q04727 773 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 ABRAXAS2Q15018 415 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 HERC3Q15034 1050 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 GALNTL5Q7Z4T8 443 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 VN1R4Q7Z5H5 301 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 RPS19BP1Q86WX3 136 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 DOLPP1Q86YN1 238 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 AGAP11Q8TF27 550 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 TMEM125Q96AQ2 219 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 FAM136AQ96C01 138 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 TM4SF19Q96DZ7 209 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 TRIM45Q9H8W5 580 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 CLK4Q9HAZ1 481 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 SLC24A3Q9HC58 644 aa16.48■□□□□ 0.23
EXOSC3-202ENST00000396521 NCOA6Q14686 2063 aaPredicted RBP16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 C19orf84I3L1E1 186 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 NDC80O14777 642 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 NEURL1O76050 574 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 SLC35G6P0C7Q6 338 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 TPSB2P20231 275 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 JAK1P23458 1154 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 MGAT1P26572 445 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 CYB561P49447 251 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 KCNJ11Q14654 390 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 TPSAB1Q15661 275 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 MAPKAPK3Q16644 382 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 SFT2D3Q587I9 215 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 FCRLBQ6BAA4 426 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 GSTA5Q7RTV2 222 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 PLD3Q8IV08 490 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 LMNTD2Q8IXW0 634 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 PRELID2Q8N945 189 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 PPFIBP2Q8ND30 876 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 ASB5Q8WWX0 329 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 CCDC138Q96M89 665 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 DMRTA2Q96SC8 542 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 HOMER3Q9NSC5 361 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 SYBUQ9NX95 663 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 HCN3Q9P1Z3 774 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 GALPQ9UBC7 116 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 DHRS7Q9Y394 339 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 NF1P21359 2839 aa16.47■□□□□ 0.23
EXOSC3-202ENST00000396521 CTAGE9A4FU28 777 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 GOLGA8KD6RF30 607 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 GOLGA8TH3BQL2 631 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 SGK494L7N484 410 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 NME2P1O60361 137 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 SLC25A12O75746 678 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 KRT38O76015 456 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 WISP2O76076 250 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 ZSCAN5DPP0CG00 497 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 IL1RNP18510 177 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 NME2P22392 152 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 IMPA1P29218 277 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 CSNK1G2P78368 415 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 RHAGQ02094 409 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 THOC5Q13769 683 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 USP10Q14694 798 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 TMEM211Q6ICI0 200 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 MEX3BQ6ZN04 569 aaKnown RBP16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 CENPUQ71F23 418 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 PRUNE1Q86TP1 453 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 ASPGQ86U10 573 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 C17orf64Q86WR6 236 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 ELP5Q8TE02 316 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 SLC13A3Q8WWT9 602 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 ABCF3Q9NUQ8 709 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 ANKRD10Q9NXR5 420 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 SAMD15Q9P1V8 674 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 PPT2Q9UMR5 302 aa16.46■□□□□ 0.23
EXOSC3-202ENST00000396521 HEATR5BQ9P2D3 2071 aa16.46■□□□□ 0.22
EXOSC3-202ENST00000396521 TRHRP34981 398 aaPredicted RBP16.45■□□□□ 0.22
EXOSC3-202ENST00000396521 ZNF75DP51815 510 aa16.45■□□□□ 0.22
EXOSC3-202ENST00000396521 OR4D2P58180 307 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms