RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ZNF282Q9UDV7 671 aaPredicted RBP16.16■□□□□ 0.18
NUP50-202ENST00000396096 VPS4AQ9UN37 437 aa16.16■□□□□ 0.18
NUP50-202ENST00000396096 NUP214P35658 2090 aaPredicted RBP16.15■□□□□ 0.18
NUP50-202ENST00000396096 GNG14A0A1W2PPG7 69 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 PI15O43692 258 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 HS6ST1O60243 411 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 FSHRP23945 695 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 CRHBPP24387 322 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 DCKP27707 260 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 RPL3P39023 403 aaKnown RBP16.15■□□□□ 0.18
NUP50-202ENST00000396096 P2RY2P41231 377 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 GABARAPL2P60520 117 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 NFE2L1Q14494 772 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 RAB39AQ14964 217 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 ANKRD34AQ69YU3 496 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 TMEM26Q6ZUK4 368 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 ARMCX6Q7L4S7 300 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 COMMD6Q7Z4G1 85 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 PDZD3Q86UT5 571 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 CHDHQ8NE62 594 aaPredicted RBP16.15■□□□□ 0.18
NUP50-202ENST00000396096 GPR156Q8NFN8 814 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 FBLIM1Q8WUP2 373 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 SUSD6Q92537 303 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 UBE2E3Q969T4 207 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 NRBF2Q96F24 287 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 CXorf21Q9HAI6 301 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 GDE1Q9NZC3 331 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 THAP10Q9P2Z0 257 aaPredicted RBP16.15■□□□□ 0.18
NUP50-202ENST00000396096 FZD4Q9ULV1 537 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 ABCG2Q9UNQ0 655 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 PCDHGA8Q9Y5G5 932 aa16.15■□□□□ 0.18
NUP50-202ENST00000396096 FABP3P05413 133 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 FCARP24071 287 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 RYKP34925 604 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 PCGF2P35227 344 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 OPRD1P41143 372 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 YAP1P46937 504 aaKnown RBP16.14■□□□□ 0.17
NUP50-202ENST00000396096 RPS6KA3P51812 740 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 CTBSQ01459 385 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 GRSF1Q12849 480 aaKnown RBP eCLIP16.14■□□□□ 0.17
NUP50-202ENST00000396096 TOP3AQ13472 1001 aaPredicted RBP16.14■□□□□ 0.17
NUP50-202ENST00000396096 RGNQ15493 299 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 DUSP6Q16828 381 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 C6orf141Q5SZD1 244 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 ZNF691Q5VV52 312 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 BROXQ5VW32 411 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 CRTC3Q6UUV7 619 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 LCTLQ6UWM7 567 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 FAM83HQ6ZRV2 1179 aaPredicted RBP16.14■□□□□ 0.17
NUP50-202ENST00000396096 R3HCC1LQ7Z5L2 792 aaKnown RBP16.14■□□□□ 0.17
NUP50-202ENST00000396096 MMAAQ8IVH4 418 aaKnown RBP16.14■□□□□ 0.17
NUP50-202ENST00000396096 METTL4Q8N3J2 472 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 OR10Q1Q8NGQ4 319 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 SNX19Q92543 992 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 MYNNQ9NPC7 610 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 PRSS16Q9NQE7 514 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 CDH7Q9ULB5 785 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 ORC6Q9Y5N6 252 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 LOC100130705A0A1B0GUX0 176 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 TRIM64BA6NI03 449 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 SH3BGRLO75368 114 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 ERGP11308 486 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 PRKACGP22612 351 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 IL12RB1P42701 662 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 ISL1P61371 349 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 GAB1Q13480 694 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 SKIV2LQ15477 1246 aaKnown RBP16.14■□□□□ 0.17
NUP50-202ENST00000396096 ZNF385BQ569K4 471 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 RAD51AP1Q96B01 352 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 MTERF3Q96E29 417 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 HSH2DQ96JZ2 352 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 DPH2Q9BQC3 489 aaPredicted RBP16.14■□□□□ 0.17
NUP50-202ENST00000396096 ATAD3AQ9NVI7 634 aa16.14■□□□□ 0.17
NUP50-202ENST00000396096 ABCB7O75027 752 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 KLHL18O94889 574 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 FURINP09958 794 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 FPR1P21462 350 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 KELP23276 732 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 CALRP27797 417 aaKnown RBP16.13■□□□□ 0.17
NUP50-202ENST00000396096 DNAJA1P31689 397 aaKnown RBP16.13■□□□□ 0.17
NUP50-202ENST00000396096 POLR2IP36954 125 aaKnown RBP16.13■□□□□ 0.17
NUP50-202ENST00000396096 ERVK-21P61565 698 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 PHEXP78562 749 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 CD47Q08722 323 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 CNTN1Q12860 1018 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 PPP1R8Q12972 351 aaKnown RBP16.13■□□□□ 0.17
NUP50-202ENST00000396096 C16orf72Q14CZ0 275 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 PRAMEF14Q5SWL7 426 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 PIP5KL1Q5T9C9 394 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 PRAMEF13Q5VWM6 474 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 FAM71E1Q6IPT2 247 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 OXR1Q8N573 874 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 PLA2G15Q8NCC3 412 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 OR4A15Q8NGL6 344 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 C12orf43Q96C57 262 aaKnown RBP16.13■□□□□ 0.17
NUP50-202ENST00000396096 DTNBP1Q96EV8 351 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 ASPSCR1Q9BZE9 553 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 SPNS1Q9H2V7 528 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 TMEM9Q9P0T7 183 aa16.13■□□□□ 0.17
NUP50-202ENST00000396096 BLOC1S6Q9UL45 172 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms