RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PRPS2P11908 318 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 BCKDHAP12694 445 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 PVRP15151 417 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 ACPPP15309 386 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 ENGP17813 658 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 CDH3P22223 829 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 UFM1P61960 85 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 CUL3Q13618 768 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 NOXRED1Q6NXP6 359 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 EBPLQ9BY08 206 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 ACTR5Q9H9F9 607 aaPredicted RBP19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 DLGAP4Q9Y2H0 992 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 KLK4Q9Y5K2 254 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 AP1M2Q9Y6Q5 423 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 CABIN1Q9Y6J0 2220 aa19.54■□□□□ 0.72
VCPKMT-202ENST00000395860 SIGLEC6O43699 453 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 SLC22A3O75751 556 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 GPR3P46089 330 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 MNAT1P51948 309 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 ATXN3P54252 364 aaPredicted RBP19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 DMTNQ08495 405 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 PTGR1Q14914 329 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 NR0B2Q15466 257 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 KHDRBS2Q5VWX1 349 aaKnown RBP19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 EID2Q8N6I1 236 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 TRPV3Q8NET8 790 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 BAHD1Q8TBE0 780 aaPredicted RBP19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 CREB3L4Q8TEY5 395 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 FCRL1Q96LA6 429 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 COL25A1Q9BXS0 654 aaPredicted RBP19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 SEMA6CQ9H3T2 930 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 AHSPQ9NZD4 102 aa19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 ARID1BQ8NFD5 2236 aaPredicted RBP19.53■□□□□ 0.72
VCPKMT-202ENST00000395860 TBX6O95947 436 aaPredicted RBP19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 SNRPB2P08579 225 aaKnown RBP19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 OR1D5P58170 312 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 MXRA7P84157 204 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 DEPDC1Q5TB30 811 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 NKAIN2Q5VXU1 208 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 TCEAL6Q6IPX3 200 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 FBXO42Q6P3S6 717 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 FUNDC1Q8IVP5 155 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 FAM9CQ8IZT9 166 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 METTL4Q8N3J2 472 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 TCEAL3Q969E4 200 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 C11orf24Q96F05 449 aaPredicted RBP19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 SLC45A3Q96JT2 553 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 CENPKQ9BS16 269 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 EPB41L1Q9H4G0 881 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 BAIAP2L1Q9UHR4 511 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 LAMA1P25391 3075 aa19.52■□□□□ 0.72
VCPKMT-202ENST00000395860 IGHV1OR21-1A0A087WYE8 117 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 A0A0J9YVX5 310 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 B2RBV5 119 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 ANKRD65E5RJM6 399 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 NR5A2O00482 541 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 CAPN5O15484 640 aaPredicted RBP19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 PCDHGA12O60330 932 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 SDC1P18827 310 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 RAP1GDS1P52306 607 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 LAIR1Q6GTX8 287 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 MINDY1Q8N5J2 469 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 Q8N9G6 341 aaPredicted RBP19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 OR6C4Q8NGE1 309 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 PROKR1Q8TCW9 393 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 NCSTNQ92542 709 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 SLC7A6OSQ96CW6 309 aaPredicted RBP19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 TEX37Q96LM6 180 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 FCRL4Q96PJ5 515 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 F2RL3Q96RI0 385 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 SLC25A23Q9BV35 468 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 DPY30Q9C005 99 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 ZMYND15Q9H091 742 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 TMEM45AQ9NWC5 275 aa19.52■□□□□ 0.71
VCPKMT-202ENST00000395860 ZNF318Q5VUA4 2279 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 C9JVG2 144 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 ANKRD28O15084 1053 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 NDUFS4O43181 175 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 DUX1O43812 170 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 PCDH7O60245 1069 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 CTSVO60911 334 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 SEMA3DO95025 777 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 STATHP02808 62 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 ST6GAL1P15907 406 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 PCSK2P16519 638 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 PTPN4P29074 926 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 TIA1P31483 386 aaKnown RBP eCLIP19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 KCNK10P57789 538 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 RAE1P78406 368 aaKnown RBP19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 RELAQ04206 551 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 NR1D2Q14995 579 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 ZIC1Q15915 447 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 RINLQ6ZS11 566 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 FAM92BQ6ZTR7 304 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 COMMD6Q7Z4G1 85 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 FAM181AQ8N9Y4 354 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 CLHC1Q8NHS4 586 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 CCDC74AQ96AQ1 378 aa19.51■□□□□ 0.71
VCPKMT-202ENST00000395860 KLHL29Q96CT2 875 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms