RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 VCX3BQ9H321 246 aa14.54□□□□□ -0.08
SCAF11-204ENST00000395454 NANOGQ9H9S0 305 aa14.54□□□□□ -0.08
SCAF11-204ENST00000395454 SEMA4GQ9NTN9 838 aa14.54□□□□□ -0.08
SCAF11-204ENST00000395454 UCKL1Q9NWZ5 548 aa14.54□□□□□ -0.08
SCAF11-204ENST00000395454 ACTR3BQ9P1U1 418 aa14.54□□□□□ -0.08
SCAF11-204ENST00000395454 RAPGEFL1Q9UHV5 662 aa14.54□□□□□ -0.08
SCAF11-204ENST00000395454 DLGAP4Q9Y2H0 992 aa14.54□□□□□ -0.08
SCAF11-204ENST00000395454 CROCCQ5TZA2 2017 aa14.54□□□□□ -0.08
SCAF11-204ENST00000395454 CFAP54Q96N23 3096 aa14.54□□□□□ -0.08
SCAF11-204ENST00000395454 CLGNO14967 610 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 DFNA5O60443 496 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 PRMT3O60678 531 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 KCNJ13O60928 360 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 NPPBP16860 134 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 AMD1P17707 334 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 TCN1P20061 433 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-204ENST00000395454 CCT8P50990 548 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 NEK2P51955 445 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 CLNS1AP54105 237 aaKnown RBP14.53□□□□□ -0.08
SCAF11-204ENST00000395454 PWP1Q13610 501 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 SHBQ15464 509 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 SLC2A7Q6PXP3 512 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 MSANTD1Q6ZTZ1 278 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 DHFR2Q86XF0 187 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 NRROSQ86YC3 692 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 DCUN1D3Q8IWE4 304 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 GTF2H4Q92759 462 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 DPY30Q9C005 99 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 PRDM8Q9NQV8 689 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 SLAMF8Q9P0V8 285 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 TBC1D29Q9UFV1 150 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 LRCH1Q9Y2L9 728 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 PCDHGA11Q9Y5H2 935 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 GOLGA4Q13439 2230 aaKnown RBP14.53□□□□□ -0.08
SCAF11-204ENST00000395454 TRBV5-3A0A0A0MS03 114 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 PGRP06401 933 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 SDC1P18827 310 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 IDSP22304 550 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 EPHA8P29322 1005 aaPredicted RBP14.53□□□□□ -0.08
SCAF11-204ENST00000395454 NHLH1Q02575 133 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 ARHGAP19Q14CB8 494 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 ATG9BQ674R7 924 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 GKN2Q86XP6 184 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 GATAD2AQ86YP4 633 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 TICAM1Q8IUC6 712 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 FAM46DQ8NEK8 389 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 NEIL2Q969S2 332 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 RAD51AP1Q96B01 352 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 MED8Q96G25 268 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 TMEM74Q96NL1 305 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 CGREF1Q99674 301 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 EFCAB11Q9BUY7 163 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 ALG2Q9H553 416 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 IL1RL2Q9HB29 575 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 SIRT5Q9NXA8 310 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 TAAR2Q9P1P5 351 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 MAN2B2Q9Y2E5 1009 aa14.53□□□□□ -0.08
SCAF11-204ENST00000395454 YKT6O15498 198 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 SLC35G4P0C7Q5 338 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 HOXB9P17482 250 aaPredicted RBP14.52□□□□□ -0.09
SCAF11-204ENST00000395454 ATP6V1B2P21281 511 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 HTR1EP28566 365 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 SLC7A1P30825 629 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 GSK3BP49841 420 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 CLCNKAP51800 687 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 DGKQP52824 942 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 DEFB133Q30KQ1 61 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 FAM174BQ3ZCQ3 159 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 RABL3Q5HYI8 236 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 SPATA24Q86W54 205 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 LAS2Q8IYD9 372 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 SPDYE1Q8NFV5 336 aaPredicted RBP14.52□□□□□ -0.09
SCAF11-204ENST00000395454 OR7G3Q8NG95 312 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 SETD7Q8WTS6 366 aaKnown RBP14.52□□□□□ -0.09
SCAF11-204ENST00000395454 SLCO4A1Q96BD0 722 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 MTFMTQ96DP5 389 aaKnown RBP14.52□□□□□ -0.09
SCAF11-204ENST00000395454 APIPQ96GX9 242 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 RSRC1Q96IZ7 334 aaKnown RBP14.52□□□□□ -0.09
SCAF11-204ENST00000395454 MENTQ9BUN1 341 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 TRIM15Q9C019 465 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 VPS29Q9UBQ0 182 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 ACSL5Q9ULC5 683 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 PPT2Q9UMR5 302 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 WDR37Q9Y2I8 494 aa14.52□□□□□ -0.09
SCAF11-204ENST00000395454 PROB1E7EW31 1015 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 LMO7DNF2Z398 122 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 YY2O15391 372 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 LRP3O75074 770 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 RPN2P04844 631 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 ANXA6P08133 673 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 PEX2P28328 305 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 HSD17B2P37059 387 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 CSRP2Q16527 193 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 SPANXN4Q5MJ08 99 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 LRIF1Q5T3J3 769 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 CAPRIN2Q6IMN6 1127 aaKnown RBP14.51□□□□□ -0.09
SCAF11-204ENST00000395454 NOXRED1Q6NXP6 359 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 IZUMO2Q6UXV1 221 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 PDSS2Q86YH6 399 aa14.51□□□□□ -0.09
SCAF11-204ENST00000395454 SYTL1Q8IYJ3 562 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms