RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SLC19A1P41440 591 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 GSSP48637 474 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 CLK1P49759 484 aaKnown RBP17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 VEZF1Q14119 521 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 DGKKQ5KSL6 1271 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 GPR153Q6NV75 609 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 PSRC1Q6PGN9 363 aaPredicted RBP17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 FAM124AQ86V42 546 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 ARMC8Q8IUR7 673 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 LACC1Q8IV20 430 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 LYSMD1Q96S90 227 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 TPT1P8Q9HAU6 139 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 ZNF229Q9UJW7 825 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 ZNF451Q9Y4E5 1061 aa17.71■□□□□ 0.43
PCDHA1-202ENST00000394633 IGLV3-16A0A075B6K0 115 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 TMEM229AB2RXF0 380 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 AIREO43918 545 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 ABLIM3O94929 683 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 IGSF6O95976 241 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 OR56A5P0C7T3 313 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 CD22P20273 847 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 GADD45AP24522 165 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 C21orf33P30042 268 aaPredicted RBP17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 HOXD12P35452 270 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 MAPK8P45983 427 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 PTPN5P54829 565 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 PFN3P60673 137 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 SLC13A2Q13183 592 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 ZNF404Q494X3 552 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 TSEN54Q7Z6J9 526 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 TMEM150AQ86TG1 271 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 LYSMD2Q8IV50 215 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 ZNF461Q8TAF7 563 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 FCGR1BQ92637 280 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 PROX1Q92786 737 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 SH3KBP1Q96B97 665 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 BBS2Q9BXC9 721 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 ABCB10Q9NRK6 738 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 PSORS1C1Q9UIG5 152 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 CLEC4EQ9ULY5 219 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 YIPF1Q9Y548 306 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 INSL6Q9Y581 213 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 PABPN1LA6NDY0 278 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 RFPL2O75678 378 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 MPC1LP0DKB6 136 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 SERPINA4P29622 427 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 RRM2P31350 389 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 CSNK2BP67870 215 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 TUBA1BP68363 451 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 PTSQ03393 145 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 CDC20Q12834 499 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 COLEC12Q5KU26 742 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 TPRG1Q6ZUI0 275 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 TUBA1AQ71U36 451 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 P3H2Q8IVL5 708 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 CLP1Q92989 425 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 ASIC4Q96FT7 647 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 TRMT2BQ96GJ1 504 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 MMP27Q9H306 513 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 TMEM184CQ9NVA4 438 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 TMPRSS11EQ9UL52 423 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 FZD4Q9ULV1 537 aa17.7■□□□□ 0.42
PCDHA1-202ENST00000394633 GFYI3L273 518 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 TEX28O15482 410 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 MYO1DO94832 1006 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 LHCGRP22888 699 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 CSTF3Q12996 717 aaKnown RBP17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 SELENBP1Q13228 472 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 TBCEQ15813 527 aaPredicted RBP17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 Q6ZNB5 142 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 HERVK_113Q902F9 699 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 MAL2Q969L2 176 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 SP140LQ9H930 580 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 VPS29Q9UBQ0 182 aa17.69■□□□□ 0.42
PCDHA1-202ENST00000394633 TLL1O43897 1013 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 MYOGP15173 224 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 AQP1P29972 269 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 GRK5P34947 590 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 CA8P35219 290 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 PPM1AP35813 382 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 GGT2P36268 569 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 CTSKP43235 329 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 ELP6Q0PNE2 266 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 FAM109BQ6ICB4 259 aaPredicted RBP17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 TMEM53Q6P2H8 277 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 ARL14EPQ8N8R7 260 aaPredicted RBP17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 WDR20Q8TBZ3 569 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 MTERF1Q99551 399 aaKnown RBP17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 DUSP26Q9BV47 211 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 ZBP1Q9H171 429 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 RUBCNLQ9H714 662 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 AMBNQ9NP70 447 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 PLCXD1Q9NUJ7 323 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 PCDHGB3Q9Y5G1 929 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 C1orf226A1L170 272 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 AGAP5A6NIR3 686 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 SUV39H1O43463 412 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 CYP2A7P20853 494 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 SERPINB1P30740 379 aa17.68■□□□□ 0.42
PCDHA1-202ENST00000394633 C21orf58P58505 322 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms