RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 INSM2Q96T92 566 aaPredicted RBP14.48□□□□□ -0.09
GPC3-202ENST00000394299 MENTQ9BUN1 341 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 EFCAB11Q9BUY7 163 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 TMEM121BQ9BXQ6 578 aaPredicted RBP14.48□□□□□ -0.09
GPC3-202ENST00000394299 CLDND1Q9NY35 253 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 ZNF639Q9UID6 485 aa14.48□□□□□ -0.09
GPC3-202ENST00000394299 DENND4AQ7Z401 1863 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 ZNF682O95780 498 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 ADH1BP00325 375 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TRPC1P48995 793 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 MLF2Q15773 248 aaPredicted RBP14.47□□□□□ -0.09
GPC3-202ENST00000394299 ADRM1Q16186 407 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 HIST2H2ACQ16777 129 aaPredicted RBP14.47□□□□□ -0.09
GPC3-202ENST00000394299 MPEG1Q2M385 716 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 NADK2Q4G0N4 442 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 SPIN4Q56A73 249 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 HIST2H2AA3Q6FI13 130 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TMIGD1Q6UXZ0 262 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 NUDT18Q6ZVK8 323 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 PTOV1Q86YD1 416 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 DCUN1D3Q8IWE4 304 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 IL17RCQ8NAC3 791 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TNIP2Q8NFZ5 429 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 DNAJB8Q8NHS0 232 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 REXO5Q96IC2 774 aaKnown RBP14.47□□□□□ -0.09
GPC3-202ENST00000394299 FERD3LQ96RJ6 166 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TPT1P8Q9HAU6 139 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 CA5BQ9Y2D0 317 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3DA0A087WVF3 549 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3IA0A087WXS9 549 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3EA0A087X179 549 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3KA0A087X1G2 549 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3FA6NER0 549 aaPredicted RBP14.47□□□□□ -0.09
GPC3-202ENST00000394299 OR52A4PA6NMU1 304 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 ENO4A6NNW6 628 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3LB9A6J9 549 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 PRMT3O60678 531 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 DEAF1O75398 565 aaPredicted RBP14.47□□□□□ -0.09
GPC3-202ENST00000394299 DIRAS1O95057 198 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 PRSS23O95084 383 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 EPN2O95208 641 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 STATHP02808 62 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3HP0C7X1 549 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TAS2R50P59544 299 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 VAC14Q08AM6 782 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 SGCGQ13326 291 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 LAPTM4AQ15012 233 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 PAGE2BQ5JRK9 111 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 ZNF776Q68DI1 518 aaPredicted RBP14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3GQ6DHY5 549 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3CQ6IPX1 549 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 FAM129CQ86XR2 697 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 ZZZ3Q8IYH5 903 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 TBC1D3Q8IZP1 549 aaPredicted RBP14.47□□□□□ -0.09
GPC3-202ENST00000394299 ANKRD53Q8N9V6 530 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 LINC01555Q8NAE3 123 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.47□□□□□ -0.09
GPC3-202ENST00000394299 C12orf66Q96MD2 445 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 SLC17A9Q9BYT1 436 aa14.47□□□□□ -0.09
GPC3-202ENST00000394299 FAM120CQ9NX05 1096 aaKnown RBP14.47□□□□□ -0.09
GPC3-202ENST00000394299 SMPD3Q9NY59 655 aaPredicted RBP14.47□□□□□ -0.09
GPC3-202ENST00000394299 A0A1W2PQF6 199 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 H3BNH8 94 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 FOXE1O00358 373 aaPredicted RBP14.46□□□□□ -0.09
GPC3-202ENST00000394299 GNGT2O14610 69 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 KMOO15229 486 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 H6PDO95479 791 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 CEACAM5P06731 702 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 GPX2P18283 190 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 ARSFP54793 590 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 PPP2CBP62714 309 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 PPP2CAP67775 309 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 TFF2Q03403 129 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 C2orf80Q0P641 193 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 CLCA4Q14CN2 919 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 RAB30Q15771 203 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 DPY19L1Q2PZI1 675 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 CNPY1Q3B7I2 92 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 VTCN1Q7Z7D3 282 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 ZNF786Q8N393 782 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 OXR1Q8N573 874 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 DHRSXQ8N5I4 330 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 C16orf78Q8WTQ4 265 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 COQ8BQ96D53 544 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 REPS1Q96D71 796 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 F2RL3Q96RI0 385 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 IMP3Q9NV31 184 aaKnown RBP14.46□□□□□ -0.09
GPC3-202ENST00000394299 THEGQ9P2T0 379 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 DGKBQ9Y6T7 804 aa14.46□□□□□ -0.09
GPC3-202ENST00000394299 A0A1W2PPV9 198 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 RNGTTO60942 597 aaKnown RBP14.46□□□□□ -0.1
GPC3-202ENST00000394299 KLF8O95600 359 aaPredicted RBP14.46□□□□□ -0.1
GPC3-202ENST00000394299 RETP07949 1114 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 SLC35G4P0C7Q5 338 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 AQP1P29972 269 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 NTSR1P30989 418 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 IGFALSP35858 605 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 LTBRP36941 435 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 CLDN2P57739 230 aa14.46□□□□□ -0.1
GPC3-202ENST00000394299 HBA1P69905 142 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms