RNA–Protein interactions for RNA: ENST00000393588.8

CASP3-203, Transcript of caspase 3, humanhuman

TSL 4 BASIC

Gene CASP3, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-203ENST00000393588 PTPRTO14522 1441 aa3.36□□□□□ -1.87
CASP3-203ENST00000393588 NPATQ14207 1427 aa3.36□□□□□ -1.87
CASP3-203ENST00000393588 VPS8Q8N3P4 1428 aa3.36□□□□□ -1.87
CASP3-203ENST00000393588 STRCQ7RTU9 1775 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 TCOF1Q13428 1488 aaKnown RBP3.35□□□□□ -1.87
CASP3-203ENST00000393588 LRRC9Q6ZRR7 1453 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 ANKRD18BA2A2Z9 1011 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 TLX2O43763 284 aaPredicted RBP3.35□□□□□ -1.87
CASP3-203ENST00000393588 HPP00738 406 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 CSN3P07498 182 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 PRG2P13727 222 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 SELEP16581 610 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 ELAVL4P26378 380 aaKnown RBP3.35□□□□□ -1.87
CASP3-203ENST00000393588 POLR2LP62875 67 aaKnown RBP3.35□□□□□ -1.87
CASP3-203ENST00000393588 RASGEF1BQ0VAM2 473 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 EIPR1Q53HC9 387 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 FAM182AQ5T1J6 154 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 C3P1Q6ZMU1 363 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 CAMKMTQ7Z624 323 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 MOB3AQ96BX8 217 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 LINC00615Q96LM1 132 aaPredicted RBP3.35□□□□□ -1.87
CASP3-203ENST00000393588 CPNE1Q99829 537 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 ATF6BQ99941 703 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 PI4K2AQ9BTU6 479 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 CCDC106Q9BWC9 280 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 CDH20Q9HBT6 801 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 DDX25Q9UHL0 483 aaKnown RBP3.35□□□□□ -1.87
CASP3-203ENST00000393588 ZNF107Q9UII5 783 aaPredicted RBP3.35□□□□□ -1.87
CASP3-203ENST00000393588 MAGED1Q9Y5V3 778 aaPredicted RBP3.35□□□□□ -1.87
CASP3-203ENST00000393588 STYXL1Q9Y6J8 313 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 PREX1Q8TCU6 1659 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 DHX29Q7Z478 1369 aaKnown RBP3.35□□□□□ -1.87
CASP3-203ENST00000393588 ARID2Q68CP9 1835 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 RTEL1-TNFRSF6BF6WH68 1400 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 PLA2R1Q13018 1463 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 CCDC141Q6ZP82 1450 aa3.35□□□□□ -1.87
CASP3-203ENST00000393588 CAMSAP1Q5T5Y3 1602 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 MROH1Q8NDA8 1641 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 MYO3AQ8NEV4 1616 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 IGLV4-3A0A075B6K6 122 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 C2CD4DB7Z1M9 353 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 AHCYL1O43865 530 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 ECE2O60344 883 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 GALR3O60755 368 aaPredicted RBP3.34□□□□□ -1.87
CASP3-203ENST00000393588 CLDN15P56746 228 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 UBXN2AP68543 259 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 DHODHQ02127 395 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 PRKG2Q13237 762 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 NPTX1Q15818 432 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 SPECC1Q5M775 1068 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 OR4C11Q6IEV9 310 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 TIPARPQ7Z3E1 657 aaKnown RBP3.34□□□□□ -1.87
CASP3-203ENST00000393588 TSPAN14Q8NG11 270 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 FEVQ99581 238 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 PRRG4Q9BZD6 226 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 DNAI2Q9GZS0 605 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 EGLN3Q9H6Z9 239 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 DNAJC4Q9NNZ3 241 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 CPSF2Q9P2I0 782 aaKnown RBP3.34□□□□□ -1.87
CASP3-203ENST00000393588 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.34□□□□□ -1.87
CASP3-203ENST00000393588 CPSF3Q9UKF6 684 aaKnown RBP3.34□□□□□ -1.87
CASP3-203ENST00000393588 PRDM4Q9UKN5 801 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 ELF5Q9UKW6 265 aaPredicted RBP3.34□□□□□ -1.87
CASP3-203ENST00000393588 IGSF1Q8N6C5 1336 aa3.34□□□□□ -1.87
CASP3-203ENST00000393588 PZPP20742 1482 aa3.34□□□□□ -1.88
CASP3-203ENST00000393588 ABCC3O15438 1527 aa3.34□□□□□ -1.88
CASP3-203ENST00000393588 ARHGEF5Q12774 1597 aa3.34□□□□□ -1.88
CASP3-203ENST00000393588 NEURL4Q96JN8 1562 aa3.34□□□□□ -1.88
CASP3-203ENST00000393588 CEP170BQ9Y4F5 1589 aaPredicted RBP3.34□□□□□ -1.88
CASP3-203ENST00000393588 MROH2AA6NES4 1674 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 CLTCQ00610 1675 aaKnown RBP3.33□□□□□ -1.88
CASP3-203ENST00000393588 MYH14Q7Z406 1995 aaKnown RBP3.33□□□□□ -1.88
CASP3-203ENST00000393588 hCG_1809904A0A1W2PP81 198 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 A0A1W2PPE2 198 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 A0A1W2PR64 198 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 MTMR11A4FU01 709 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 SURF4O15260 269 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 NXPH4O95158 308 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 MYOGP15173 224 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 LIG4P49917 911 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 CLNS1AP54105 237 aaKnown RBP3.33□□□□□ -1.88
CASP3-203ENST00000393588 EIF5P55010 431 aaKnown RBP3.33□□□□□ -1.88
CASP3-203ENST00000393588 TRA2BP62995 288 aaKnown RBP3.33□□□□□ -1.88
CASP3-203ENST00000393588 SRSF9Q13242 221 aaKnown RBP eCLIP3.33□□□□□ -1.88
CASP3-203ENST00000393588 BMP2KLQ5H9B9 411 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 GPD1LQ8N335 351 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 ANKRD13CQ8N6S4 541 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 SLC4A11Q8NBS3 891 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 NOA1Q8NC60 698 aaKnown RBP3.33□□□□□ -1.88
CASP3-203ENST00000393588 OR10G7Q8NGN6 311 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 TYMSOSQ8TAI1 123 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 MUS81Q96NY9 551 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 KLHL5Q96PQ7 755 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 CHORDC1Q9UHD1 332 aaPredicted RBP3.33□□□□□ -1.88
CASP3-203ENST00000393588 IL17BQ9UHF5 180 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 BAIAP2L1Q9UHR4 511 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 RPS6KA6Q9UK32 745 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 KLF2Q9Y5W3 355 aaPredicted RBP3.33□□□□□ -1.88
CASP3-203ENST00000393588 SNX8Q9Y5X2 465 aa3.33□□□□□ -1.88
CASP3-203ENST00000393588 ABCC5O15440 1437 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms