RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 PRAMEF13Q5VWM6 474 aa24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 GALNT10Q86SR1 603 aa24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 ZDHHC21Q8IVQ6 265 aa24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 YAF2Q8IY57 180 aa24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 ZNF740Q8NDX6 193 aa24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 PJA1Q8NG27 643 aa24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 WDR48Q8TAF3 677 aa24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 SETD7Q8WTS6 366 aaKnown RBP24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 MBOAT4Q96T53 435 aa24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 RBM4BQ9BQ04 359 aaKnown RBP24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 RBM4Q9BWF3 364 aaKnown RBP24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 THEGQ9P2T0 379 aa24.62■■□□□ 1.53
SMARCD3-203ENST00000392811 ZNF385BQ569K4 471 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 CCNYL2Q5T2Q4 361 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 AGBL4Q5VU57 503 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 CHPFQ8IZ52 775 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 DNAJC5GQ8N7S2 189 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 ADAMTS16Q8TE57 1224 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 TM7SF3Q9NS93 570 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 ATP6V1HQ9UI12 483 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 KELP23276 732 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 KDELR2P33947 212 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 GAB1Q13480 694 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 LRRTM4Q86VH4 590 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 TFGQ92734 400 aaPredicted RBP24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 CXorf40BQ96DE9 158 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 MPP4Q96JB8 637 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 YTHDF1Q9BYJ9 559 aaKnown RBP24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 REEP4Q9H6H4 257 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 FAM118AQ9NWS6 357 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 VNN3Q9NY84 501 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 FZD4Q9ULV1 537 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 TDRKHQ9Y2W6 561 aaKnown RBP24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 U3KQV3 271 aa24.61■■□□□ 1.53
SMARCD3-203ENST00000392811 PCDH8O95206 1070 aa24.6■■□□□ 1.53
SMARCD3-203ENST00000392811 PRKACGP22612 351 aa24.6■■□□□ 1.53
SMARCD3-203ENST00000392811 SHHQ15465 462 aa24.6■■□□□ 1.53
SMARCD3-203ENST00000392811 DCUN1D3Q8IWE4 304 aa24.6■■□□□ 1.53
SMARCD3-203ENST00000392811 SYNPOQ8N3V7 929 aa24.6■■□□□ 1.53
SMARCD3-203ENST00000392811 KXD1Q9BQD3 176 aa24.6■■□□□ 1.53
SMARCD3-203ENST00000392811 CHST8Q9H2A9 424 aa24.6■■□□□ 1.53
SMARCD3-203ENST00000392811 RNASET2O00584 256 aaKnown RBP24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 YAP1P46937 504 aaKnown RBP24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 CST6Q15828 149 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 IER5LQ5T953 404 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 LCTLQ6UWM7 567 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 OR4A15Q8NGL6 344 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 ZFP90Q8TF47 636 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 NRTNQ99748 197 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 AMBRA1Q9C0C7 1298 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 BHLHE41Q9C0J9 482 aaPredicted RBP24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 RPS6KA6Q9UK32 745 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 VPS4AQ9UN37 437 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 ABCG2Q9UNQ0 655 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 KLHL18O94889 574 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 NUDT7P0C024 238 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 ELK4P28324 431 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 PIK3CBP42338 1070 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 TTC23Q5W5X9 447 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 ACAT2Q9BWD1 397 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 RSPH9Q9H1X1 276 aaPredicted RBP24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 LTB4R2Q9NPC1 389 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 IL1RAPQ9NPH3 570 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 SERGEFQ9UGK8 458 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 RSL24D1Q9UHA3 163 aaKnown RBP24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 GMEB1Q9Y692 573 aa24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 CFAP20Q9Y6A4 193 aaKnown RBP24.59■■□□□ 1.53
SMARCD3-203ENST00000392811 HS6ST1O60243 411 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 PPIBP23284 216 aaKnown RBP24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 SLC5A2P31639 672 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 EIF2DP41214 584 aaKnown RBP24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 SH3BGRP55822 239 aaPredicted RBP24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 MC1RQ01726 317 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 EPS8Q12929 822 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 VN1R5Q7Z5H4 357 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 HIPK1Q86Z02 1210 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 METTL4Q8N3J2 472 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 OXR1Q8N573 874 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 OR4K1Q8NGD4 311 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 C16orf78Q8WTQ4 265 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 UBE2E3Q969T4 207 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 PBX4Q9BYU1 374 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 LMAN2LQ9H0V9 348 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 MBNL1Q9NR56 388 aaKnown RBP24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 DOCK8Q8NF50 2099 aa24.58■■□□□ 1.53
SMARCD3-203ENST00000392811 TRPM6Q9BX84 2022 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 SEMG1P04279 462 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 APODP05090 189 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 ABCB1P08183 1280 aaPredicted RBP24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 PIGAP37287 484 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 CAMK2GQ13555 558 aaPredicted RBP24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 VEZF1Q14119 521 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 RGNQ15493 299 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 METRNLQ641Q3 311 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 TMIGD1Q6UXZ0 262 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 VTCN1Q7Z7D3 282 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 SPATA9Q9BWV2 254 aa24.57■■□□□ 1.52
SMARCD3-203ENST00000392811 IFT80Q9P2H3 777 aaPredicted RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms