RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 SLC38A2Q96QD8 506 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 KLHL1Q9NR64 748 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 DNAJB9Q9UBS3 223 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 CD207Q9UJ71 328 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 CHURC1-FNTBB4DL54 471 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 SLC16A5O15375 505 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 GADD45GO95257 159 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 SEMA4FO95754 770 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 HLA-DQA2P01906 255 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 IL3P08700 152 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 PTSQ03393 145 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 FAAH2Q6GMR7 532 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 ZFAND4Q86XD8 727 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 CCDC116Q8IYX3 515 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 SLC22A15Q8IZD6 547 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 METTL27Q8N6F8 245 aaPredicted RBP15.94■□□□□ 0.14
SNX9-201ENST00000392185 ZNF563Q8TA94 476 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 MZB1Q8WU39 189 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 FAM120CQ9NX05 1096 aaKnown RBP15.94■□□□□ 0.14
SNX9-201ENST00000392185 CA5BQ9Y2D0 317 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 PCDHGB3Q9Y5G1 929 aa15.94■□□□□ 0.14
SNX9-201ENST00000392185 ARFGEF1Q9Y6D6 1849 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 OR6C74A6NCV1 312 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 SOX6P35712 828 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 TNFAIP8L3Q5GJ75 292 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 BLOC1S3Q6QNY0 202 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 GALNT10Q86SR1 603 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 NFKBIDQ8NI38 313 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 TMBIM1Q969X1 311 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 APIPQ96GX9 242 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 FAM83CQ9BQN1 747 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 IFT80Q9P2H3 777 aaPredicted RBP15.93■□□□□ 0.14
SNX9-201ENST00000392185 NUMBLQ9Y6R0 609 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 JUNDP17535 347 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 CCT3P49368 545 aaKnown RBP15.93■□□□□ 0.14
SNX9-201ENST00000392185 GTDC1Q4AE62 458 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 AHSA2Q719I0 299 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 HMGN2P46Q86SG4 172 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 RNF175Q8N4F7 328 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 UBXN10Q96LJ8 280 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 CLIC3O95833 236 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 MMP2P08253 660 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 PCSK2P16519 638 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 CD247P20963 164 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 ARRB1P49407 418 aaPredicted RBP15.93■□□□□ 0.14
SNX9-201ENST00000392185 DPPA4Q7L190 304 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 DDHD1Q8NEL9 900 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 SLC38A4Q969I6 547 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 ZNF576Q9H609 170 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 RAB26Q9ULW5 256 aa15.93■□□□□ 0.14
SNX9-201ENST00000392185 ZDBF2Q9HCK1 2354 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 DPPA5A6NC42 116 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 FADS2P1A8MWK0 482 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 H3BNH8 94 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 CDC123O75794 336 aaPredicted RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 AK4P27144 223 aaPredicted RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 TIA1P31483 386 aaKnown RBP eCLIP15.92■□□□□ 0.146e-6■■□□□ 14.2
SNX9-201ENST00000392185 TOP3AQ13472 1001 aaPredicted RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 SWT1Q5T5J6 900 aaKnown RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 RNF130Q86XS8 419 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 KBTBD2Q8IY47 623 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 RASGEF1AQ8N9B8 481 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 POP5Q969H6 163 aaKnown RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 PKMYT1Q99640 499 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 C5AR2Q9P296 337 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 PRORSD1PA6NEY8 169 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 SDC3O75056 442 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 NME6O75414 186 aaPredicted RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 RPS17P08708 135 aaKnown RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 SHMT2P34897 504 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 CRISP3P54108 245 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 ZCCHC7Q8N3Z6 543 aaKnown RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 OR7G3Q8NG95 312 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 REEP4Q9H6H4 257 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 APOBEC3BQ9UH17 382 aaKnown RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 ERGIC3Q9Y282 383 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 EP400Q96L91 3159 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 FADS2O95864 444 aaKnown RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 PRLP01236 227 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 DBTP11182 482 aaKnown RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 OR4D2P58180 307 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 SNAPC1Q16533 368 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 USP53Q70EK8 1073 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 SLC34A3Q8N130 599 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 ATP6V1C2Q8NEY4 427 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 DNAJB8Q8NHS0 232 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 METTL21AQ8WXB1 218 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 FAM192AQ9GZU8 254 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 EPB41L1Q9H4G0 881 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 SLC2A4RGQ9NR83 387 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 DDX28Q9NUL7 540 aaKnown RBP15.92■□□□□ 0.14
SNX9-201ENST00000392185 ACSL6Q9UKU0 697 aa15.92■□□□□ 0.14
SNX9-201ENST00000392185 CAPN5O15484 640 aaPredicted RBP15.91■□□□□ 0.14
SNX9-201ENST00000392185 SLC25A12O75746 678 aa15.91■□□□□ 0.14
SNX9-201ENST00000392185 RSL1D1O76021 490 aaKnown RBP15.91■□□□□ 0.14
SNX9-201ENST00000392185 TRIM16LQ309B1 348 aa15.91■□□□□ 0.14
SNX9-201ENST00000392185 SFT2D3Q587I9 215 aa15.91■□□□□ 0.14
SNX9-201ENST00000392185 KANK2Q63ZY3 851 aa15.91■□□□□ 0.14
SNX9-201ENST00000392185 NEK5Q6P3R8 708 aa15.91■□□□□ 0.14
SNX9-201ENST00000392185 BHLHA9Q7RTU4 235 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms