RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ADPGKQ9BRR6 497 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 TRIM51Q9BSJ1 452 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 MCRIP2Q9BUT9 160 aaKnown RBP1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 CDK19Q9BWU1 502 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 TDRD1Q9BXT4 1180 aaKnown RBP1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 NACAP1Q9BZK3 213 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 TRIM15Q9C019 465 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 WWTR1Q9GZV5 400 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 HOXD1Q9GZZ0 328 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 GFRA4Q9GZZ7 299 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 UBQLN3Q9H347 655 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 ZWILCHQ9H900 591 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 MTHFD2LQ9H903 347 aaPredicted RBP1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 MED20Q9H944 212 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 LMAN1LQ9HAT1 526 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 B3GAT2Q9NPZ5 323 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 TBC1D13Q9NVG8 400 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 HACD3Q9P035 362 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 VPS18Q9P253 973 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 ASIC3Q9UHC3 531 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 SLC12A6Q9UHW9 1150 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 FBXL4Q9UKA2 621 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 AGTPBP1Q9UPW5 1226 aa1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 RUVBL2Q9Y230 463 aaKnown RBP1.44□□□□□ -2.18
RNU6-440P-201ENST00000390882 MYH15Q9Y2K3 1946 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 LOC105371242A0A075B767 164 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 A0A0B4J203 849 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 IQCMA0A1B0GVH7 501 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 A0A1W2PR80 420 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 NDUFAF8A1L188 74 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 MTMR11A4FU01 709 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 OOEPA6NGQ2 149 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 NKX6-3A6NJ46 265 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 A8MVM7 634 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 PRSS46E5RG02 174 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 SLC1A7O00341 560 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 SLC30A4O14863 429 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 SAP30O75446 220 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 DUS4LO95620 317 aaKnown RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 CLDN1O95832 211 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 RLN1P04808 185 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 ZSCAN5DPP0CG00 497 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 ZNF883P0CG24 379 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 SP9P0CG40 484 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TRIM49P0CI25 452 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TRIM49CP0CI26 452 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 KRT3P12035 628 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 MYOGP15173 224 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 LBPP18428 481 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 RBMS1P29558 406 aaKnown RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 SSTR1P30872 391 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TIA1P31483 386 aaKnown RBP eCLIP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TCF7P36402 384 aaPredicted RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 MMP12P39900 470 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 OR3A3P47888 321 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 NPBWR1P48145 328 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TAF6P49848 677 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 CLDN17P56750 224 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 GSCP56915 257 aaPredicted RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 GUCY2DQ02846 1103 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 CETN1Q12798 172 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TRA2AQ13595 282 aaKnown RBP eCLIP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 SCARB2Q14108 478 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 MTF1Q14872 753 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 NECTIN1Q15223 517 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 E2F5Q15329 346 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 LBHQ53QV2 105 aaPredicted RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 MPP7Q5T2T1 576 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 HECTD3Q5T447 861 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 LCE3CQ5T5A8 94 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 ZNF772Q68DY9 489 aaPredicted RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TXNRD3NBQ6F5E7 133 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 CASC4Q6P4E1 433 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 ZNF613Q6PF04 617 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 C11orf88Q6PI97 169 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 BTNL8Q6UX41 500 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 MACC1Q6ZN28 852 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 ZNF497Q6ZNH5 498 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TMEM182Q6ZP80 229 aaPredicted RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 STXBP4Q6ZWJ1 553 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 COX8CQ7Z4L0 72 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 PIGWQ7Z7B1 504 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 ANKRD23Q86SG2 305 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 MEX3DQ86XN8 651 aaKnown RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 CROCCP3Q8IVE0 287 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 KLHL7Q8IXQ5 586 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TCEANCQ8N8B7 351 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 NKAIN3Q8N8D7 197 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 LRTM2Q8N967 370 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 GOT1L1Q8NHS2 421 aaPredicted RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 ZNF519Q8TB69 540 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 CHURC1Q8WUH1 139 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 UBLCP1Q8WVY7 318 aaPredicted RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 ST6GALNAC6Q969X2 333 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 EXOC4Q96A65 974 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 OMA1Q96E52 524 aa1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 RBM41Q96IZ5 413 aaKnown RBP1.43□□□□□ -2.18
RNU6-440P-201ENST00000390882 C2orf48Q96LS8 159 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms