RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 KRT12Q99456 494 aa3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 TRIM51Q9BSJ1 452 aa3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 MCRIP2Q9BUT9 160 aaKnown RBP3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 NACAP1Q9BZK3 213 aa3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 LSG1Q9H089 658 aaKnown RBP3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 RPF1Q9H9Y2 349 aaKnown RBP3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 IARS2Q9NSE4 1012 aaKnown RBP3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 EXOC1Q9NV70 894 aa3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 TMOD3Q9NYL9 352 aa3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 AGTPBP1Q9UPW5 1226 aa3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 NCKAP1Q9Y2A7 1128 aa3.79□□□□□ -1.8
SNORA40.2-201ENST00000390847 NPHP3Q7Z494 1330 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 IGKV3D-15A0A087WSY6 115 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 MTMR11A4FU01 709 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 NPIPA3F8WFD2 350 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 CGAP01215 116 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 SERPINB2P05120 415 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 TRIM49P0CI25 452 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 TRIM49CP0CI26 452 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 CD59P13987 128 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 RBMS1P29558 406 aaKnown RBP3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 NPBWR1P48145 328 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 CYCSP99999 105 aaKnown RBP3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 TAB1Q15750 504 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 TRIM65Q6PJ69 517 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 ZNF497Q6ZNH5 498 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 GPR141Q7Z602 305 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 PRUNE1Q86TP1 453 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 HOOK3Q86VS8 718 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 MEX3DQ86XN8 651 aaKnown RBP3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 NKAIN3Q8N8D7 197 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 ATAD1Q8NBU5 361 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 POM121L2Q96KW2 1035 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 JAKMIP1Q96N16 626 aaKnown RBP3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 PARK7Q99497 189 aaKnown RBP3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 ALKBH7Q9BT30 221 aaPredicted RBP3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 SYT11Q9BT88 431 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 FGFBP2Q9BYJ0 223 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 HOXD1Q9GZZ0 328 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 UPF3AQ9H1J1 476 aaKnown RBP3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 C10orf88Q9H8K7 445 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 POLKQ9UBT6 870 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 NOCTQ9UK39 431 aaKnown RBP3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 PILRBQ9UKJ0 227 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 POMT2Q9UKY4 750 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 KLK4Q9Y5K2 254 aa3.78□□□□□ -1.8
SNORA40.2-201ENST00000390847 KBTBD13C9JR72 458 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 H0Y626 953 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 PGRMC2O15173 223 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 CTDSPLO15194 276 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 SURF4O15260 269 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 ZSCAN5DPP0CG00 497 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 DPEP1P16444 411 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 PIK3R1P27986 724 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 CCND3P30281 292 aaPredicted RBP3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 TNNT3P45378 269 aaPredicted RBP3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 LUMP51884 338 aaPredicted RBP3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 HUNKP57058 714 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 MTF1Q14872 753 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 NECTIN1Q15223 517 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 DUSP5Q16690 384 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 FASTKD1Q53R41 847 aaKnown RBP3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 ATP1A1-AS1Q5TC04 95 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 KIF6Q6ZMV9 814 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 MACC1Q6ZN28 852 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 ZER1Q7Z7L7 766 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 LRRTM1Q86UE6 522 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 CATSPERDQ86XM0 798 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 NUP37Q8NFH4 326 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 OR4D10Q8NGI6 311 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 AFAP1L1Q8TED9 768 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 UBLCP1Q8WVY7 318 aaPredicted RBP3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 ATP6V1E2Q96A05 226 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 SGF29Q96ES7 293 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 NSMCE3Q96MG7 304 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 ZNF599Q96NL3 588 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 AGAP3Q96P47 875 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 TSSK2Q96PF2 358 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 ZNF300Q96RE9 604 aaPredicted RBP3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 IWS1Q96ST2 819 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 MLPHQ9BV36 600 aaPredicted RBP3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 UBQLN3Q9H347 655 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 DPEP2Q9H4A9 486 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 MED20Q9H944 212 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 B3GAT2Q9NPZ5 323 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 TEX10Q9NXF1 929 aaPredicted RBP3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 SEPT10Q9P0V9 454 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 FBXL4Q9UKA2 621 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 CDH7Q9ULB5 785 aa3.77□□□□□ -1.81
SNORA40.2-201ENST00000390847 A0A087WZ39 114 aa3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 OOEPA6NGQ2 149 aa3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 RTCAO00442 366 aaKnown RBP3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 SLC30A4O14863 429 aa3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 KIF5CO60282 957 aa3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 SAP30O75446 220 aa3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 DLATP10515 647 aaKnown RBP3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 OR1D5P58170 312 aa3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 POU5F1Q01860 360 aaKnown RBP3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 CETN1Q12798 172 aa3.76□□□□□ -1.81
SNORA40.2-201ENST00000390847 ABRQ12979 859 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms