RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 NHLRC3Q5JS37 347 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 FGD3Q5JSP0 725 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 MARC1Q5VT66 337 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 WSCD1Q658N2 575 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CYB5D1Q6P9G0 228 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 EMBQ6PCB8 327 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 C17orf53Q8N3J3 647 aaPredicted RBP1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 MINDY1Q8N5J2 469 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 GBP7Q8N8V2 638 aaPredicted RBP1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 FLVCR1-AS1Q8TAF5 88 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ATL1Q8WXF7 558 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 TSACCQ96A04 125 aaPredicted RBP1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ESAMQ96AP7 390 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 STRADBQ9C0K7 418 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 GOLPH3LQ9H4A5 285 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 MARCH7Q9H992 704 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CDH20Q9HBT6 801 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 RAVER2Q9HCJ3 691 aaKnown RBP1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CUTCQ9NTM9 273 aa1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CPSF3Q9UKF6 684 aaKnown RBP1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ZNF215Q9UL58 517 aaPredicted RBP1.71□□□□□ -2.14
RNU6-1040P-201ENST00000383974 NPHP3Q7Z494 1330 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 hCG_38984A0A1B0GV85 526 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 RNF103O00237 685 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ZNF253O75346 499 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 BAIAP3O94812 1187 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 SEMA4FO95754 770 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 LINGO3P0C6S8 592 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 EPCAMP16422 314 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 PSMC6P62333 389 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CREB5Q02930 508 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 NONOQ15233 471 aaKnown RBP eCLIP1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 TTC31Q49AM3 519 aaPredicted RBP1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 FAAH2Q6GMR7 532 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 PAMR1Q6UXH9 720 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 IQCHQ86VS3 1027 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 OR4C15Q8NGM1 316 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 OR5M9Q8NGP3 310 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 HDAC2Q92769 488 aaKnown RBP1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CASP10Q92851 521 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 SLC22A18Q96BI1 424 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 GSN-AS1Q9NRJ2 163 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 Q9UF83 564 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 SLC24A2Q9UI40 661 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 PILRBQ9UKJ0 227 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 FER1L5A0AVI2 2057 aa1.7□□□□□ -2.14
RNU6-1040P-201ENST00000383974 TRIM77I1YAP6 450 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 PTGESO14684 152 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 TNFSF12O43508 249 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 RPS6KA5O75582 802 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 IGKV3-11P04433 115 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CSN3P07498 182 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 HOXC4P09017 264 aaPredicted RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 SAGP10523 405 aaPredicted RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 UMPSP11172 480 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 RPL34P49207 117 aaKnown RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 KNOP1Q1ED39 458 aaKnown RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ZNF530Q6P9A1 599 aaPredicted RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 MCM10Q7L590 875 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CPEB2Q7Z5Q1 589 aaKnown RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ADGRD2Q7Z7M1 963 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 LRRC49Q8IUZ0 686 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 RPAP2Q8IXW5 612 aaPredicted RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 RYBPQ8N488 228 aaPredicted RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 PROX1Q92786 737 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 NABP1Q96AH0 204 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 RANBP9Q96S59 729 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 SDCBP2Q9H190 292 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 PNNQ9H307 717 aaKnown RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 GDE1Q9NZC3 331 aa1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ZNF346Q9UL40 294 aaKnown RBP1.69□□□□□ -2.14
RNU6-1040P-201ENST00000383974 TRAV24A0A0B4J272 114 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 KLF18A0A0U1RQI7 1052 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 WI2-2373I1.2A0A1W2PRP0 233 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 E7ENQ6 273 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 DOK2O60496 412 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ENTPD3O75355 529 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 GJB3O75712 270 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ATP6AP2O75787 350 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 KBTBD11O94819 623 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 GSRP00390 522 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 F3P13726 295 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CD1DP15813 335 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CYP11B2P19099 503 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 ELK1P19419 428 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 SAT1P21673 171 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 GIFP27352 417 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 SLC1A4P43007 532 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 RGRP47804 291 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 NAP1L1P55209 391 aaKnown RBP1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 LTB4RQ15722 352 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 NTRK2Q16620 822 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 SLC22A6Q4U2R8 563 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 SPANXN4Q5MJ08 99 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 PRSS55Q6UWB4 352 aaPredicted RBP1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 CCDC60Q8IWA6 550 aaPredicted RBP1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 APPL2Q8NEU8 664 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 OR6T1Q8NGN1 323 aa1.68□□□□□ -2.14
RNU6-1040P-201ENST00000383974 GTSF1Q8WW33 167 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms