RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 GHDCQ8N2G8 530 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 C12orf76Q8N812 135 aaPredicted RBP14.44□□□□□ -0.1
SNPH-202ENST00000381873 C9orf43Q8TAL5 461 aaPredicted RBP14.44□□□□□ -0.1
SNPH-202ENST00000381873 NKD1Q969G9 470 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 MGME1Q9BQP7 344 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 SLC39A3Q9BRY0 314 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 CD244Q9BZW8 370 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 RNF11Q9Y3C5 154 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 PCDHGB5Q9Y5G0 923 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 LAMA4Q16363 1823 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 ZNF208O43345 1280 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 ZNF3P17036 446 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 TM4SF4P48230 202 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 SOX4Q06945 474 aaPredicted RBP14.44□□□□□ -0.1
SNPH-202ENST00000381873 KCNC3Q14003 757 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 SLC2A7Q6PXP3 512 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 NPAS3Q8IXF0 933 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 ZDHHC14Q8IZN3 488 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 PEX13Q92968 403 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 GLYATL1Q969I3 302 aa14.44□□□□□ -0.1
SNPH-202ENST00000381873 SPIN1Q9Y657 262 aaPredicted RBP14.44□□□□□ -0.1
SNPH-202ENST00000381873 BTN3A3O00478 584 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 H6PDO95479 791 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 RAB2AP61019 212 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 SYT16Q17RD7 645 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 C10orf62Q5T681 223 aaPredicted RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 B3GNT9Q6UX72 402 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 CMTR2Q8IYT2 770 aaKnown RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 ZFP3Q96NJ6 502 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 SFXN1Q9H9B4 322 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 OAZ3Q9UMX2 235 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 PCDHGA2Q9Y5H1 932 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 PAPPAQ13219 1627 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 ZNF840PA6NDX5 716 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 FANCGO15287 622 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 TPD52L2O43399 206 aaKnown RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 POLR2CP19387 275 aaPredicted RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 CDKN1CP49918 316 aaPredicted RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 VBP1P61758 197 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 UFM1P61960 85 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 RPS21P63220 83 aaKnown RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 LMAN2Q12907 356 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 ELAVL3Q14576 367 aaKnown RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 LASP1Q14847 261 aaKnown RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 AAK1Q2M2I8 961 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 RNF220Q5VTB9 566 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 C12orf40Q86WS4 652 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 RAB2BQ8WUD1 216 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 KLHL6Q8WZ60 621 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 OR2M4Q96R27 311 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 CST11Q9H112 138 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 TIMMDC1Q9NPL8 285 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 PCDHGB1Q9Y5G3 927 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 VSTM5A8MXK1 200 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 KLF8O95600 359 aaPredicted RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 SWI5Q1ZZU3 235 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 P4HA3Q7Z4N8 544 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 TMCO2Q7Z6W1 182 aaPredicted RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 SYVN1Q86TM6 617 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 ZNF598Q86UK7 904 aaKnown RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 SMG8Q8ND04 991 aaKnown RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 PHOSPHO1Q8TCT1 267 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 TBX5Q99593 518 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 ZNF395Q9H8N7 513 aaPredicted RBP14.43□□□□□ -0.1
SNPH-202ENST00000381873 MARCH7Q9H992 704 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 FANCFQ9NPI8 374 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 WDR45Q9Y484 360 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 CLDN25C9JDP6 229 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 GBAP04062 536 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 PROKR2Q8NFJ6 384 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 POPDC3Q9HBV1 291 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 IFT46Q9NQC8 304 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 POFUT2Q9Y2G5 429 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 PCDHB3Q9Y5E6 796 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 BACE2Q9Y5Z0 518 aa14.43□□□□□ -0.1
SNPH-202ENST00000381873 H7BY64 318 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 AHSA1O95433 338 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 MAP3K8P41279 467 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 ELOCQ15369 112 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 PRRT3Q5FWE3 981 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 OR9I1Q8NGQ6 314 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 IMP4Q96G21 291 aaKnown RBP14.42□□□□□ -0.1
SNPH-202ENST00000381873 PRAP1Q96NZ9 151 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 LGR4Q9BXB1 951 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 RNF121Q9H920 327 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 TSPAN6O43657 245 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 CCNKO75909 580 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 OR3A3P47888 321 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 OR3A2P47893 321 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 STK19P49842 368 aaPredicted RBP14.42□□□□□ -0.1
SNPH-202ENST00000381873 NANOGNBQ7Z5D8 188 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 LNX2Q8N448 690 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 KLHL36Q8N4N3 616 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 DEFB119Q8N690 84 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 Q8N9G6 341 aaPredicted RBP14.42□□□□□ -0.1
SNPH-202ENST00000381873 SLC2A13Q96QE2 648 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 OR8D2Q9GZM6 311 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 SEC61A2Q9H9S3 476 aa14.42□□□□□ -0.1
SNPH-202ENST00000381873 IL23AQ9NPF7 189 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms