RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 LRRC74AQ0VAA2 488 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 IQCCQ4KMZ1 466 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 SPIN4Q56A73 249 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.74■□□□□ 0.11
VPS16-203ENST00000380469 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.74■□□□□ 0.11
VPS16-203ENST00000380469 BRAT1Q6PJG6 821 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 HSD11B1LQ7Z5J1 315 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 DDX53Q86TM3 631 aaKnown RBP15.74■□□□□ 0.11
VPS16-203ENST00000380469 RAVER1Q8IY67 606 aaKnown RBP15.74■□□□□ 0.11
VPS16-203ENST00000380469 MFSD4AQ8N468 514 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 OR4A15Q8NGL6 344 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 SPPL2AQ8TCT8 520 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 FCGR1BQ92637 280 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 MAL2Q969L2 176 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 ITPKCQ96DU7 683 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 ZHX1-C8orf76Q96EF9 292 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 C11orf24Q96F05 449 aaPredicted RBP15.74■□□□□ 0.11
VPS16-203ENST00000380469 ITPAQ9BY32 194 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 SPG21Q9NZD8 308 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 SH3BP4Q9P0V3 963 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 STOX2Q9P2F5 926 aaPredicted RBP15.74■□□□□ 0.11
VPS16-203ENST00000380469 PCDHGA6Q9Y5G7 932 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 PMF1-BGLAPU3KQ54 211 aa15.74■□□□□ 0.11
VPS16-203ENST00000380469 EFCAB9A8MZ26 197 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 TNFRSF11BO00300 401 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 SGTAO43765 313 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 LRG1P02750 347 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 CATP04040 527 aaKnown RBP15.73■□□□□ 0.11
VPS16-203ENST00000380469 LCKP06239 509 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 BMP4P12644 408 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 GJA1P17302 382 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 UBE2UQ5VVX9 321 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 GPR153Q6NV75 609 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 PAGE2Q7Z2X7 111 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 CAMKMTQ7Z624 323 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 NAGSQ8N159 534 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 APH1BQ8WW43 257 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 COQ8BQ96D53 544 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 KCNC2Q96PR1 638 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 COPS4Q9BT78 406 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 ALOXE3Q9BYJ1 711 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 ANKHQ9HCJ1 492 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 ZNF282Q9UDV7 671 aaPredicted RBP15.73■□□□□ 0.11
VPS16-203ENST00000380469 RNF6Q9Y252 685 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 A0A1W2PRU2 124 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 ADAMDEC1O15204 470 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 AOC2O75106 756 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 ABCB1P08183 1280 aaPredicted RBP15.73■□□□□ 0.11
VPS16-203ENST00000380469 IDSP22304 550 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 CLK1P49759 484 aaKnown RBP15.73■□□□□ 0.11
VPS16-203ENST00000380469 SELENOWP63302 87 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 ELP6Q0PNE2 266 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 ZNF648Q5T619 568 aaPredicted RBP15.73■□□□□ 0.11
VPS16-203ENST00000380469 ANGPTL8Q6UXH0 198 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 Q6ZVL8 140 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 GPR156Q8NFN8 814 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 CHTF18Q8WVB6 975 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 DNASE1L2Q92874 299 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 MYDGFQ969H8 173 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 SLC38A4Q969I6 547 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 SMG9Q9H0W8 520 aaKnown RBP15.73■□□□□ 0.11
VPS16-203ENST00000380469 RAD18Q9NS91 495 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 KIAA1671Q9BY89 1806 aa15.73■□□□□ 0.11
VPS16-203ENST00000380469 E9PQ18 207 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 ETHE1O95571 254 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 VIPP01282 170 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 TGFBR2P37173 567 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 CRATP43155 626 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 DCDC1P59894 354 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 TRAM1L1Q8N609 369 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 SLAIN1Q8ND83 568 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 OR7G3Q8NG95 312 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 HUS1BQ8NHY5 278 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 RPL3LQ92901 407 aaKnown RBP15.72■□□□□ 0.11
VPS16-203ENST00000380469 HHIPL1Q96JK4 782 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 FOPNLQ96NB1 174 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 RIOK2Q9BVS4 552 aaKnown RBP15.72■□□□□ 0.11
VPS16-203ENST00000380469 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.72■□□□□ 0.11
VPS16-203ENST00000380469 OSGIN1Q9UJX0 560 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 PNMA8BQ9ULN7 279 aaPredicted RBP15.72■□□□□ 0.11
VPS16-203ENST00000380469 TESMINQ9Y4I5 508 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 TMEM202A6NGA9 273 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 RNASET2O00584 256 aaKnown RBP15.72■□□□□ 0.11
VPS16-203ENST00000380469 GGT2P36268 569 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 ETV3P41162 512 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 CRYBA2P53672 197 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 TUBA1BP68363 451 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 NOGQ13253 232 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 ASTLQ6HA08 431 aaPredicted RBP15.72■□□□□ 0.11
VPS16-203ENST00000380469 TUBA1AQ71U36 451 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 TMC8Q8IU68 726 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 OR2A12Q8NGT7 310 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 OR4K3Q96R72 315 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 SIGLEC11Q96RL6 698 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 FEVQ99581 238 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 ZSCAN5AQ9BUG6 496 aa15.72■□□□□ 0.11
VPS16-203ENST00000380469 SLIRPQ9GZT3 109 aaKnown RBP15.72■□□□□ 0.11
VPS16-203ENST00000380469 TTC34A8MYJ7 566 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 ZNF197O14709 1029 aa15.71■□□□□ 0.11
VPS16-203ENST00000380469 TSPAN6O43657 245 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms