RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CBR4Q8N4T8 237 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 FAM26EQ8N5C1 309 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 OR7G1Q8NGA0 311 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 OR5AR1Q8NGP9 310 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 OR2T34Q8NGX1 318 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 OR2T3Q8NH03 318 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 SNX19Q92543 992 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 NEIL2Q969S2 332 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 RELTQ969Z4 430 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 MACROD1Q9BQ69 325 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 SORBS1Q9BX66 1292 aaKnown RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 XKR8Q9H6D3 395 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 C12orf49Q9H741 205 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 LIN28AQ9H9Z2 209 aaKnown RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 UTS2RQ9UKP6 389 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 INVSQ9Y283 1065 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 PCDHGA8Q9Y5G5 932 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 SCN8AQ9UQD0 1980 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3DA0A087WVF3 549 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3IA0A087WXS9 549 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3EA0A087X179 549 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3KA0A087X1G2 549 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 A0A0G2JPF8 293 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3FA6NER0 549 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 HNRNPCL3B7ZW38 293 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3LB9A6J9 549 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 KCNH1O95259 989 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3HP0C7X1 549 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 HNRNPCL4P0DMR1 293 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 CD22P20273 847 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 RHDQ02161 417 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 EMX2Q04743 252 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 UBE3AQ05086 875 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 DMC1Q14565 340 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 FRG2Q64ET8 278 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3GQ6DHY5 549 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3CQ6IPX1 549 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 METTL2BQ6P1Q9 378 aaKnown RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TBC1D3Q8IZP1 549 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TRAM1L1Q8N609 369 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 MAGEE2Q8TD90 523 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TMEM125Q96AQ2 219 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 FRG2BQ96QU4 278 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 CCM2Q9BSQ5 444 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 SFXN1Q9H9B4 322 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 IMP3Q9NV31 184 aaKnown RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 GPRC5BQ9NZH0 403 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 PLEKHM1Q9Y4G2 1056 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 FAM234BA2RU67 622 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 HOXC11O43248 304 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 TSC22D2O75157 780 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 EBLN1P0CF75 366 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 IL10P22301 178 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 PSMB5P28074 263 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 S100A3P33764 101 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 PTGER1P34995 402 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 ETV1P50549 477 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 PFN3P60673 137 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 ACSM2AQ08AH3 577 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 KRT33BQ14525 404 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 ACSM2BQ68CK6 577 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 KIAA1211LQ6NV74 962 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 FAM83HQ6ZRV2 1179 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 ERN2Q76MJ5 926 aaKnown RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 OFCC1Q8IZS5 231 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 FAM86B1Q8N7N1 296 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 LEMD2Q8NC56 503 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 OTUB2Q96DC9 234 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 DPH2Q9BQC3 489 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 EFHD1Q9BUP0 239 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 VCXQ9H320 206 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 RPF2Q9H7B2 306 aaKnown RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 PRSS16Q9NQE7 514 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 RPRD1BQ9NQG5 326 aaKnown RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 MBNL1Q9NR56 388 aaKnown RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 STOX2Q9P2F5 926 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-201ENST00000379433 SLC23A2Q9UGH3 650 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 RIMS3Q9UJD0 308 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 OAZ3Q9UMX2 235 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 CNTRLQ7Z7A1 2325 aa10.43□□□□□ -0.74
NEDD9-201ENST00000379433 LTBP2Q14767 1821 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 EDDM13A0A1B0GTR0 161 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 GNGT2O14610 69 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 SMPD2O60906 423 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 DIRAS1O95057 198 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 ETHE1O95571 254 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF682O95780 498 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 C8GP07360 202 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 UQCRBP14927 111 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 POU3F3P20264 500 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 CDKN2CP42773 168 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 RPS14P62263 151 aaKnown RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 ATAT1Q5SQI0 421 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 ZFAND4Q86XD8 727 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 CLECL1Q8IZS7 167 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 C10orf111Q8N326 155 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 C1orf52Q8N6N3 182 aaKnown RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 FAM162AQ96A26 154 aa10.42□□□□□ -0.74
NEDD9-201ENST00000379433 EFHD2Q96C19 240 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-201ENST00000379433 ROPN1LQ96C74 230 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms