RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TBCDQ9BTW9 1192 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 OSBPL10Q9BXB5 764 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 BHLHE41Q9C0J9 482 aaPredicted RBP10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 PITHD1Q9GZP4 211 aaPredicted RBP10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 PCBD2Q9H0N5 130 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 FBRSQ9HAH7 460 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 PELI2Q9HAT8 420 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 DMRT3Q9NQL9 472 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 ATAD3AQ9NVI7 634 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 ATP6V1HQ9UI12 483 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 RPS6KA6Q9UK32 745 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 PCDHB11Q9Y5F2 797 aa10.09□□□□□ -0.79
POLR2J3-201ENST00000379340 UPK1AO00322 258 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 RNASET2O00584 256 aaKnown RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 PCDH7O60245 1069 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 KCNJ13O60928 360 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 PGM3O95394 542 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 CST1P01037 141 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ALBP02768 609 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ABCB1P08183 1280 aaPredicted RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 CXCR2P25025 360 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 SOX11P35716 441 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 MTHFRP42898 656 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ARSFP54793 590 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 DMPKQ09013 629 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 VEZF1Q14119 521 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ATAT1Q5SQI0 421 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ZNF776Q68DI1 518 aaPredicted RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 SYCE2Q6PIF2 218 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ENPP6Q6UWR7 440 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ABRAXAS1Q6UWZ7 409 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 GPR155Q7Z3F1 870 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 PATL1Q86TB9 770 aaKnown RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ANKRD46Q86W74 232 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 SFTPA1Q8IWL2 248 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 RAB42Q8N4Z0 105 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 TMEM105Q8N8V8 129 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 FAM47BQ8NA70 645 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 PLA2G15Q8NCC3 412 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 OR7A2PQ8NGA2 310 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 MAGEE2Q8TD90 523 aaPredicted RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 SNX19Q92543 992 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 GFM2Q969S9 779 aaKnown RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 TMBIM1Q969X1 311 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 DGCR14Q96DF8 476 aaKnown RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 PYURFQ96I23 114 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 PHF7Q9BWX1 381 aaPredicted RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 TEX101Q9BY14 249 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 RMI1Q9H9A7 625 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 NTN4Q9HB63 628 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 MYNNQ9NPC7 610 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 SLC6A13Q9NSD5 602 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 USE1Q9NZ43 259 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ZNF282Q9UDV7 671 aaPredicted RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 HCN2Q9UL51 889 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ACSL5Q9ULC5 683 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 SUFUQ9UMX1 484 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 ASF1AQ9Y294 204 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 WBP11Q9Y2W2 641 aaKnown RBP10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 COMMD3-BMI1R4GMX3 469 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 V9GYQ6 96 aa10.08□□□□□ -0.8
POLR2J3-201ENST00000379340 PCM1Q15154 2024 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 A0A087WXM4 84 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 GNG14A0A1W2PPG7 69 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 MED19A0JLT2 244 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 IGLON5A6NGN9 336 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 GNGT2O14610 69 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 MID1O15344 667 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 PRKD3O94806 890 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 PCDH8O95206 1070 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 BMP10O95393 424 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 ETHE1O95571 254 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 SERPINA1P01009 418 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 PCCBP05166 539 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 GSNP06396 782 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 ENGP17813 658 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 DDX5P17844 614 aaKnown RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 IDSP22304 550 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 GDI1P31150 447 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 MAGEA2P43356 314 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 ADARB1P78563 741 aaKnown RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 VMACQ2NL98 169 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 WSCD2Q2TBF2 565 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 RFX4Q33E94 735 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 CNPY1Q3B7I2 92 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 CATSPEREQ5SY80 951 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 THEMIS2Q5TEJ8 643 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 METRNLQ641Q3 311 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 KIAA1161Q6NSJ0 714 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 TTC33Q6PID6 262 aaPredicted RBP10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 ZNF621Q6ZSS3 439 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 USP51Q70EK9 711 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 IKBIPQ70UQ0 350 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 SATL1Q86VE3 508 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 ZDHHC13Q8IUH4 622 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 CHPFQ8IZ52 775 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 ALDH16A1Q8IZ83 802 aa10.07□□□□□ -0.8
POLR2J3-201ENST00000379340 METTL4Q8N3J2 472 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms