RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 F3P13726 295 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 HOXB9P17482 250 aaPredicted RBP16.96■□□□□ 0.3
CTTN-203ENST00000376561 SLC7A1P30825 629 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 OR4D2P58180 307 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 CYP4F2P78329 520 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 CYP4F3Q08477 520 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 LPCAT4Q643R3 524 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 KBTBD2Q8IY47 623 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 LILRA2Q8N149 483 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.96■□□□□ 0.3
CTTN-203ENST00000376561 SLCO4A1Q96BD0 722 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 SH3GL1Q99961 368 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 CAAP1Q9H8G2 361 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 RIMS3Q9UJD0 308 aa16.96■□□□□ 0.3
CTTN-203ENST00000376561 A0A1W2PPC4 97 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 GABRR3A8MPY1 467 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 RFXANKO14593 260 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 TNFP01375 233 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 PIM1P11309 404 aaPredicted RBP16.95■□□□□ 0.3
CTTN-203ENST00000376561 PEX2P28328 305 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 SOX11P35716 441 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 NUDT1P36639 197 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 SLC19A1P41440 591 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 CDKN2CP42773 168 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 TRIP10Q15642 601 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 LRRC36Q1X8D7 754 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 ANKRD26P1Q6NSI1 321 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 CAMKMTQ7Z624 323 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 ADCK2Q7Z695 626 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 SLC9B2Q86UD5 537 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 TMEM132CQ8N3T6 1108 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 JPH3Q8WXH2 748 aaPredicted RBP16.95■□□□□ 0.3
CTTN-203ENST00000376561 NELL1Q92832 810 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 ZNF583Q96ND8 569 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 GBP5Q96PP8 586 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 MS4A8Q9BY19 250 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 FAM120CQ9NX05 1096 aaKnown RBP16.95■□□□□ 0.3
CTTN-203ENST00000376561 PLXND1Q9Y4D7 1925 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 PCDHB3Q9Y5E6 796 aa16.95■□□□□ 0.3
CTTN-203ENST00000376561 OR1F1O43749 312 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 GSNP06396 782 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 KLK1P06870 262 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 THEGLP0DJG4 465 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 LAMP1P11279 417 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 NCK1P16333 377 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 PEBP1P30086 187 aaKnown RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 SERPINB1P30740 379 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 SHMT2P34897 504 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 HPCAL1P37235 193 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 ILF3Q12906 894 aaKnown RBP eCLIP16.94■□□□□ 0.38e-12■■■■□ 20
CTTN-203ENST00000376561 AASDHQ4L235 1098 aaPredicted RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 DEPDC1Q5TB30 811 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 KHDRBS2Q5VWX1 349 aaKnown RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 AMIGO1Q86WK6 493 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 FAM20CQ8IXL6 584 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 SIX5Q8N196 739 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 CANT1Q8WVQ1 401 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 LCN9Q8WX39 176 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 SNX19Q92543 992 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 MIEF2Q96C03 454 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 CXorf40BQ96DE9 158 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 PKP2Q99959 881 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 ORAI3Q9BRQ5 295 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 DUSP26Q9BV47 211 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 MRPS30Q9NP92 439 aaKnown RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 GPR27Q9NS67 375 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 SPHK1Q9NYA1 384 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 OR6C2Q9NZP2 312 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 MCM8Q9UJA3 840 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 EXO1Q9UQ84 846 aaKnown RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 ARHGEF17Q96PE2 2063 aaPredicted RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 TRBV23OR9-2A0A075B6M9 112 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 SPTY2D1-AS1A0A0U1RR47 76 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 KLHL18O94889 574 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 HNRNPFP52597 415 aaKnown RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 MLLT1Q03111 559 aaPredicted RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 DUOXA1Q1HG43 343 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 CPTPQ5TA50 214 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 ADHFE1Q8IWW8 467 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 GOLM1Q8NBJ4 401 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 OR2L3Q8NG85 312 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 OR4E2Q8NGC2 313 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 OR10A6Q8NH74 314 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 AURKBQ96GD4 344 aaPredicted RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 NELL2Q99435 816 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 PRPF18Q99633 342 aaKnown RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 ZNF184Q99676 751 aaPredicted RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 TCEAL2Q9H3H9 227 aaPredicted RBP16.94■□□□□ 0.3
CTTN-203ENST00000376561 AHSPQ9NZD4 102 aa16.94■□□□□ 0.3
CTTN-203ENST00000376561 YY2O15391 372 aa16.93■□□□□ 0.3
CTTN-203ENST00000376561 LCMT2O60294 686 aaKnown RBP16.93■□□□□ 0.3
CTTN-203ENST00000376561 SNRNP200O75643 2136 aaKnown RBP16.93■□□□□ 0.3
CTTN-203ENST00000376561 SEMA3DO95025 777 aa16.93■□□□□ 0.3
CTTN-203ENST00000376561 HRH2P25021 359 aa16.93■□□□□ 0.3
CTTN-203ENST00000376561 TRPC1P48995 793 aa16.93■□□□□ 0.3
CTTN-203ENST00000376561 ABATP80404 500 aa16.93■□□□□ 0.3
CTTN-203ENST00000376561 EIF2B5Q13144 721 aaKnown RBP16.93■□□□□ 0.3
CTTN-203ENST00000376561 IZUMO2Q6UXV1 221 aa16.93■□□□□ 0.3
CTTN-203ENST00000376561 PROSER1Q86XN7 944 aa16.93■□□□□ 0.3
CTTN-203ENST00000376561 TMEM126BQ8IUX1 230 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms