RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 MAGED4Q96JG8 741 aa21.89■■□□□ 1.09
C9orf47-202ENST00000375850 SERPINB12Q96P63 405 aa21.89■■□□□ 1.09
C9orf47-202ENST00000375850 LPAR4Q99677 370 aa21.89■■□□□ 1.09
C9orf47-202ENST00000375850 LZTFL1Q9NQ48 299 aa21.89■■□□□ 1.09
C9orf47-202ENST00000375850 C20orf96Q9NUD7 363 aaPredicted RBP21.89■■□□□ 1.09
C9orf47-202ENST00000375850 HCN3Q9P1Z3 774 aa21.89■■□□□ 1.09
C9orf47-202ENST00000375850 TRMT6Q9UJA5 497 aaKnown RBP21.89■■□□□ 1.09
C9orf47-202ENST00000375850 FBXO5Q9UKT4 447 aa21.89■■□□□ 1.09
C9orf47-202ENST00000375850 CPAMD8Q8IZJ3 1885 aa21.89■■□□□ 1.09
C9orf47-202ENST00000375850 HEATR5BQ9P2D3 2071 aa21.89■■□□□ 1.09
C9orf47-202ENST00000375850 IL1RNP18510 177 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 EEF1DP29692 281 aaKnown RBP21.88■■□□□ 1.09
C9orf47-202ENST00000375850 TUBA3CQ13748 450 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 HERC3Q15034 1050 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 ZXDCQ2QGD7 858 aaPredicted RBP21.88■■□□□ 1.09
C9orf47-202ENST00000375850 ANKRD22Q5VYY1 191 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 TUBA3EQ6PEY2 450 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 FAM98AQ8NCA5 519 aaKnown RBP21.88■■□□□ 1.09
C9orf47-202ENST00000375850 MDS2Q8NDY4 140 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 SLC13A3Q8WWT9 602 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 GPR137Q96N19 417 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 HAUS8Q9BT25 410 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 AARSD1Q9BTE6 412 aaKnown RBP21.88■■□□□ 1.09
C9orf47-202ENST00000375850 PARVBQ9HBI1 364 aa21.88■■□□□ 1.09
C9orf47-202ENST00000375850 IGHV3-20A0A0C4DH32 117 aa21.87■■□□□ 1.09
C9orf47-202ENST00000375850 ASPDHA6ND91 283 aa21.87■■□□□ 1.09
C9orf47-202ENST00000375850 ESRRAP11474 423 aaPredicted RBP21.87■■□□□ 1.09
C9orf47-202ENST00000375850 COX6B1P14854 86 aa21.87■■□□□ 1.09
C9orf47-202ENST00000375850 MAGEA3P43357 314 aa21.87■■□□□ 1.09
C9orf47-202ENST00000375850 ACTN3Q08043 901 aaPredicted RBP21.87■■□□□ 1.09
C9orf47-202ENST00000375850 CAPN13Q6MZZ7 669 aaPredicted RBP21.87■■□□□ 1.09
C9orf47-202ENST00000375850 AGTRAPQ6RW13 159 aa21.87■■□□□ 1.09
C9orf47-202ENST00000375850 LCTLQ6UWM7 567 aa21.87■■□□□ 1.09
C9orf47-202ENST00000375850 GAS2L3Q86XJ1 694 aa21.87■■□□□ 1.09
C9orf47-202ENST00000375850 SCMH1Q96GD3 660 aa21.87■■□□□ 1.09
C9orf47-202ENST00000375850 MAD1L1Q9Y6D9 718 aa21.87■■□□□ 1.09
C9orf47-202ENST00000375850 MAGEB17A8MXT2 336 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 SGK494L7N484 410 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 HIST1H2AGP0C0S8 130 aaPredicted RBP21.86■■□□□ 1.09
C9orf47-202ENST00000375850 HIST1H2ADP20671 130 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 GRNP28799 593 aaKnown RBP21.86■■□□□ 1.09
C9orf47-202ENST00000375850 TERF1P54274 439 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 MEF2AQ02078 507 aaPredicted RBP21.86■■□□□ 1.09
C9orf47-202ENST00000375850 ALDH6A1Q02252 535 aaKnown RBP21.86■■□□□ 1.09
C9orf47-202ENST00000375850 OR1C1Q15619 314 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 NSDHLQ15738 373 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 PAPD4Q6PIY7 484 aaKnown RBP21.86■■□□□ 1.09
C9orf47-202ENST00000375850 Q6ZPB1 254 aaPredicted RBP21.86■■□□□ 1.09
C9orf47-202ENST00000375850 PRSS41Q7RTY9 318 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 CRLF3Q8IUI8 442 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 MYO1HQ8N1T3 1032 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 TBC1D19Q8N5T2 526 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 MAGOHBQ96A72 148 aaKnown RBP21.86■■□□□ 1.09
C9orf47-202ENST00000375850 HIST1H2AHQ96KK5 128 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 HIST1H2AJQ99878 128 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 H2AFJQ9BTM1 129 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 SARGQ9BW04 601 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 SGPP1Q9BX95 441 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 TAS2R13Q9NYV9 303 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 PDE10AQ9Y233 779 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 ZNF835Q9Y2P0 537 aa21.86■■□□□ 1.09
C9orf47-202ENST00000375850 PABPN1LA6NDY0 278 aaKnown RBP21.85■■□□□ 1.09
C9orf47-202ENST00000375850 HAUS5O94927 633 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 JAK1P23458 1154 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 CD96P40200 585 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 MPP1Q00013 466 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 PMP22Q01453 160 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 PWP1Q13610 501 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 ABRAXAS2Q15018 415 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 SFT2D3Q587I9 215 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 SLC26A11Q86WA9 606 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 EID3Q8N140 333 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 MFSD9Q8NBP5 474 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.85■■□□□ 1.09
C9orf47-202ENST00000375850 ZCCHC10Q8TBK6 192 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 NAP1L3Q99457 506 aaPredicted RBP21.85■■□□□ 1.09
C9orf47-202ENST00000375850 CLK4Q9HAZ1 481 aaKnown RBP21.85■■□□□ 1.09
C9orf47-202ENST00000375850 SH3BGRL2Q9UJC5 107 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 NAALAD2Q9Y3Q0 740 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 APCP25054 2843 aa21.85■■□□□ 1.09
C9orf47-202ENST00000375850 RDH16O75452 317 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 STATHP02808 62 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 CXCR5P32302 372 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 COILP38432 576 aaPredicted RBP21.84■■□□□ 1.09
C9orf47-202ENST00000375850 CCR8P51685 355 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 SNRPNP63162 240 aaKnown RBP21.84■■□□□ 1.09
C9orf47-202ENST00000375850 RHAGQ02094 409 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 NAE1Q13564 534 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 USP10Q14694 798 aaKnown RBP21.84■■□□□ 1.09
C9orf47-202ENST00000375850 C3AR1Q16581 482 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 HSP90AA5PQ58FG0 334 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 FCRLBQ6BAA4 426 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 MYO7BQ6PIF6 2116 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 STRA8Q7Z7C7 330 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 SPPL2CQ8IUH8 684 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 AFAP1L2Q8N4X5 818 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 KCT2Q8NC54 265 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 ABHD11Q8NFV4 315 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 SIGLEC12Q96PQ1 595 aa21.84■■□□□ 1.09
C9orf47-202ENST00000375850 GPAMQ9HCL2 828 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms