RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 PDE4DIPQ5VU43 2346 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 EVPLLA8MZ36 301 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 BNIP3LO60238 219 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 FZD6O60353 706 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 WDR47O94967 919 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 KRT6AP02538 564 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 KRT6BP04259 564 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 ZNF24P17028 368 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 RRM2P31350 389 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 HNF1BP35680 557 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 CCR2P41597 374 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 OR1E2P47887 323 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 KRT6CP48668 564 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 IDH2P48735 452 aaKnown RBP14.66□□□□□ -0.06
MSH5-203ENST00000375750 HSPA14Q0VDF9 509 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 UGT8Q16880 541 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 PLEKHG6Q3KR16 790 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 GPR65Q8IYL9 337 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 SIGLEC11Q96RL6 698 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 CDADC1Q9BWV3 514 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 PRM3Q9NNZ6 103 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 C14orf119Q9NWQ9 140 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 SLC22A14Q9Y267 594 aa14.66□□□□□ -0.06
MSH5-203ENST00000375750 ARHGEF15O94989 841 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 SEMG1P04279 462 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 POU2F1P14859 743 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 ACRV1P26436 265 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 KIR3DL1P43629 444 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 WNT3P56703 355 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 CXCR4P61073 352 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 TPRG1LQ5T0D9 272 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 Q6ZNB5 142 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 TPGS1Q6ZTW0 290 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 TSEN54Q7Z6J9 526 aaKnown RBP14.65□□□□□ -0.06
MSH5-203ENST00000375750 ZSWIM9Q86XI8 627 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 BBS7Q8IWZ6 715 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 METTL4Q8N3J2 472 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 MRPL43Q8N983 215 aaKnown RBP14.65□□□□□ -0.06
MSH5-203ENST00000375750 ATL1Q8WXF7 558 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 GGHQ92820 318 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 SLC46A2Q9BY10 475 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 CFAP97Q9P2B7 532 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 PTHP01270 115 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 ABCB1P08183 1280 aaPredicted RBP14.65□□□□□ -0.06
MSH5-203ENST00000375750 LAMP1P11279 417 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 CCR7P32248 378 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 PTCHD3Q3KNS1 767 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 IQCCQ4KMZ1 466 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 LRRC66Q68CR7 880 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.65□□□□□ -0.06
MSH5-203ENST00000375750 CCDC149Q6ZUS6 474 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 FAM124AQ86V42 546 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 P3H2Q8IVL5 708 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 SH3KBP1Q96B97 665 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 MTERF1Q99551 399 aaKnown RBP14.65□□□□□ -0.06
MSH5-203ENST00000375750 FEVQ99581 238 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 EMILIN2Q9BXX0 1053 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 HOXD1Q9GZZ0 328 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 RUBCNLQ9H714 662 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 C5orf42Q9H799 3197 aa14.65□□□□□ -0.06
MSH5-203ENST00000375750 CLDN24A6NM45 220 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 GFRA2O00451 464 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 IRS1P35568 1242 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 CTSKP43235 329 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 PROX2Q3B8N5 592 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 UBE2UQ5VVX9 321 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 NOXRED1Q6NXP6 359 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 GDPD3Q7L5L3 318 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 APCDD1Q8J025 514 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 GPR26Q8NDV2 337 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 SPPL3Q8TCT6 385 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 FOXJ1Q92949 421 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 TCEAL4Q96EI5 215 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 CTRCQ99895 268 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 BCL7BQ9BQE9 202 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 TP63Q9H3D4 680 aaPredicted RBP14.64□□□□□ -0.07
MSH5-203ENST00000375750 RETREG1Q9H6L5 497 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 ASIC5Q9NY37 505 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 CLEC4EQ9ULY5 219 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 SNX6Q9UNH7 406 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 SNX8Q9Y5X2 465 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 KCNE1BA0A087WTH5 132 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 A8MV72 311 aaPredicted RBP14.64□□□□□ -0.07
MSH5-203ENST00000375750 AP3D1O14617 1153 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 MTX2O75431 263 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 ANXA5P08758 320 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 AMD1P17707 334 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 IL1RNP18510 177 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 CSKP41240 450 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 FADDQ13158 208 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.64□□□□□ -0.076e-7■■■■□ 21
MSH5-203ENST00000375750 UBE2R2Q712K3 238 aaPredicted RBP14.64□□□□□ -0.07
MSH5-203ENST00000375750 SYT12Q8IV01 421 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 CACTIN-AS1Q8N1I8 211 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 ELMOD1Q8N336 334 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 NELL1Q92832 810 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 KCNS3Q9BQ31 491 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 SLC32A1Q9H598 525 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 CCL26Q9Y258 94 aa14.64□□□□□ -0.07
MSH5-203ENST00000375750 GLYATL1P3A0A0U1RQE8 302 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms