RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ITPKAP23677 461 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 KCNJ10P78508 379 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 TSEN54Q7Z6J9 526 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 SYT12Q8IV01 421 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 C7orf61Q8IZ16 206 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 SPATA17Q96L03 361 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 MBD1Q9UIS9 605 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 SNX6Q9UNH7 406 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 PCDHGB6Q9Y5F9 930 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 CHD9Q3L8U1 2897 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 CLCA1A8K7I4 914 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 E9PQ18 207 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 PTTG1O95997 202 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 RPLP0P05388 317 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 LAMP1P11279 417 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 HNF1BP35680 557 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 TBCEQ15813 527 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 ARMCX4Q5H9R4 360 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 RSBN1Q5VWQ0 802 aaPredicted RBP13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 SLC5A8Q8N695 610 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 FCGR1BQ92637 280 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 POP5Q969H6 163 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 YME1L1Q96TA2 773 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 ROGDIQ9GZN7 287 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 NXF2Q9GZY0 626 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 RDH14Q9HBH5 336 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 IL23AQ9NPF7 189 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 SPASTQ9UBP0 616 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 SLC22A14Q9Y267 594 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 SNX8Q9Y5X2 465 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 MYO7AQ13402 2215 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 GLYATL1P3A0A0U1RQE8 302 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 SMAD6O43541 496 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 CCNKO75909 580 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 EFEMP2O95967 443 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 OPN1SWP03999 348 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 COX7A2P14406 83 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 OR1D2P34982 312 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 GGT2P36268 569 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 ZNF45Q02386 682 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 GPR17Q13304 367 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 PTCHD3Q3KNS1 767 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 INO80DQ53TQ3 878 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 TSPAN33Q86UF1 283 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 CYP4Z2PQ8N1L4 340 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 PGBD3Q8N328 593 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 IL17RDQ8NFM7 739 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 MYDGFQ969H8 173 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 SH3KBP1Q96B97 665 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 HHIPQ96QV1 700 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 KCNS3Q9BQ31 491 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 EMILIN2Q9BXX0 1053 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 RNF38Q9H0F5 515 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 ERVK13-1Q9NX77 482 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 FBXL12Q9NXK8 326 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 EHD3Q9NZN3 535 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 OR6C75A6NL08 312 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 TMEM229AB2RXF0 380 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 CTDSP2O14595 271 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 ADRA2AP08913 450 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 ADORA3P0DMS8 318 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 ACPPP15309 386 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 CCR7P32248 378 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 OR1E2P47887 323 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 PRKCDQ05655 676 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 HSPA14Q0VDF9 509 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 ST3GAL4Q11206 333 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 MTAPQ13126 283 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 DDX39BQ13838 428 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 CYP27C1Q4G0S4 372 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 MACC1Q6ZN28 852 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 UBE2R2Q712K3 238 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 NANOGNBQ7Z5D8 188 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 ZSWIM9Q86XI8 627 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 FBXO22Q8NEZ5 403 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 SPPL2AQ8TCT8 520 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 UTP15Q8TED0 518 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 BBS2Q9BXC9 721 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 GABARAPL3Q9BY60 117 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 ATG10Q9H0Y0 220 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 TPT1P8Q9HAU6 139 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 ZNF226Q9NYT6 803 aa13.62□□□□□ -0.23
CLCNKA-202ENST00000375692 AP3D1O14617 1153 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 FGBP02675 491 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 EIF2S1P05198 315 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 RGS6P49758 472 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 DOC2BQ14184 412 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 ADGRF1Q5T601 910 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 KIAA1841Q6NSI8 718 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 ANKS3Q6ZW76 656 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 MMAAQ8IVH4 418 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 STX19Q8N4C7 294 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 EPYCQ99645 322 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 NIPSNAP1Q9BPW8 284 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 FZD4Q9ULV1 537 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 PCDHGA3Q9Y5H0 932 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 ZNF840PA6NDX5 716 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 TNFRSF11BO00300 401 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 SUV39H1O43463 412 aa13.61□□□□□ -0.23
CLCNKA-202ENST00000375692 TBL1XO60907 577 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms