RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 OR8K3Q8NH51 312 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF347Q96SE7 839 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 LRRC3Q9BY71 257 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 FTSJ1Q9UET6 329 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 FABP12A6NFH5 140 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 CHRM1P11229 460 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-203ENST00000375604 PTX3P26022 381 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-203ENST00000375604 FRMD7Q6ZUT3 714 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 TICAM1Q8IUC6 712 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 SLC22A8Q8TCC7 542 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 CCDC120Q96HB5 630 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 MED28Q9H204 178 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 MUC13Q9H3R2 512 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 SERINC1Q9NRX5 453 aa16.64■□□□□ 0.25
MCF2L-203ENST00000375604 FAM170BA6NMN3 283 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 EFCAB9A8MZ26 197 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 RPP38P78345 283 aaKnown RBP16.63■□□□□ 0.25
MCF2L-203ENST00000375604 ARL9Q6T311 187 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 KLHDC7BQ96G42 594 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 SPHK2Q9NRA0 654 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF99A8MXY4 864 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-203ENST00000375604 COLEC12Q5KU26 742 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 SYVN1Q86TM6 617 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 TTLQ8NG68 377 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 MSLNLQ96KJ4 702 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 NLE1Q9NVX2 485 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-203ENST00000375604 A0A0X1KG70 313 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 PIRO00625 290 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 HADHBP55084 474 aaKnown RBP16.63■□□□□ 0.25
MCF2L-203ENST00000375604 FAM92BQ6ZTR7 304 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 MAU2Q9Y6X3 613 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 MUSKO15146 869 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 MTRF1O75570 445 aaKnown RBP16.63■□□□□ 0.25
MCF2L-203ENST00000375604 RPLP0P05388 317 aaKnown RBP16.63■□□□□ 0.25
MCF2L-203ENST00000375604 HCAR3P49019 387 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 SPANXN4Q5MJ08 99 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 USP53Q70EK8 1073 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 TTC9BQ8N6N2 239 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 ANKFN1Q8N957 763 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 CD244Q9BZW8 370 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 USP29Q9HBJ7 922 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 Q9Y3F1 56 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 HEPACAM2A8MVW5 462 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 VILLO15195 856 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 DHFRP00374 187 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 KLK3P07288 261 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-203ENST00000375604 NTHL1P78549 312 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 PLET1Q6UQ28 207 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 TP53INP2Q8IXH6 220 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 OR9A1PQ8NGU1 263 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 CXorf21Q9HAI6 301 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 CYTH4Q9UIA0 394 aa16.63■□□□□ 0.25
MCF2L-203ENST00000375604 FAM227AF5H4B4 570 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 APOL3O95236 402 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 MSX1P28360 303 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 ITPRIPL2Q3MIP1 535 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 RBM48Q5RL73 367 aaKnown RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 PNPLA1Q8N8W4 532 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 ZBTB8BQ8NAP8 495 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 MEAF6Q9HAF1 191 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 MAN2B2Q9Y2E5 1009 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 ADH1BP00325 375 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF16P17020 682 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 DLG1Q12959 904 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 PAFAH1B3Q15102 231 aaKnown RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 KLHL6Q8WZ60 621 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 BAZ2AQ9UIF9 1905 aaKnown RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 AKAP8O43823 692 aaKnown RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 MPZL2O60487 215 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 RNGTTO60942 597 aaKnown RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 PDYNP01213 254 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 AOC1P19801 751 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 LACTB2Q53H82 288 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 METTL21CQ5VZV1 264 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 ADNP2Q6IQ32 1131 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 TMIGD1Q6UXZ0 262 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 HSH2DQ96JZ2 352 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 GPR34Q9UPC5 381 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 SCO2O43819 266 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 IQCF3P0C7M6 154 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 SPIN3Q5JUX0 258 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 RAB43Q86YS6 212 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 ZNF514Q96K75 400 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 C5orf51A6NDU8 294 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 SRRM3A6NNA2 597 aaPredicted RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 RNF13O43567 381 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 GRPRP30550 384 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 PCLAFQ15004 111 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 NPTX1Q15818 432 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 TSTQ16762 297 aaKnown RBP16.62■□□□□ 0.25
MCF2L-203ENST00000375604 KLHL36Q8N4N3 616 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 BORCS5Q969J3 196 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 SP140LQ9H930 580 aa16.62■□□□□ 0.25
MCF2L-203ENST00000375604 ABCC6O95255 1503 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 OAZ2O95190 189 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 SERPINA3P01011 423 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 HSD17B2P37059 387 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 BCAP31P51572 246 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 VBP1P61758 197 aa16.61■□□□□ 0.25
MCF2L-203ENST00000375604 XIAPP98170 497 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms