RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ABHD13Q7L211 337 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 SYNE4Q8N205 404 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 COL26A1Q96A83 441 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 CENPOQ9BU64 300 aa6.44□□□□□ -1.38
UBR4-204ENST00000375254 ACOT7O00154 380 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 RGS11O94810 467 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 CDH8P55286 799 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 RAP1AP62834 184 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 CEP68Q76N32 757 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 TCTE3Q8IZS6 198 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 RNF149Q8NC42 400 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 MARVELD3Q96A59 401 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 PCDHAC1Q9H158 963 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SCML1Q9UN30 329 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 DPYSL4O14531 572 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 TAAR5O14804 337 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ADH1AP07327 375 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SMIM6P0DI80 62 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 BUD31P41223 144 aaPredicted RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 REEP3Q6NUK4 255 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 C1orf186Q6ZWK4 172 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 FAM83FQ8NEG4 500 aaPredicted RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 CDC14AQ9UNH5 594 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SCML2Q9UQR0 700 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 DUXAA6NLW8 204 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 HBP1O60381 514 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 GADD45GO95257 159 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 C1QBP02746 253 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 GLT8D1Q68CQ7 371 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ARHGAP12Q8IWW6 846 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SLC35C1Q96A29 364 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 FAM46AQ96IP4 442 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 CHRDQ9H2X0 955 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 POLE4Q9NR33 117 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 FBXO8Q9NRD0 319 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SLC6A5Q9Y345 797 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 FBXO7Q9Y3I1 522 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 NPATQ14207 1427 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 TRBC1P01850 177 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SULT1A2P50226 295 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 OTOP3Q7RTS5 596 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SCN4BQ8IWT1 228 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ASH2LQ9UBL3 628 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 USP6P35125 1406 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 HSD17B1P14061 328 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 PTPN3P26045 913 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 DUSP4Q13115 394 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SF3B4Q15427 424 aaKnown RBP eCLIP6.43□□□□□ -1.383e-7■■■■■ 40.7
UBR4-204ENST00000375254 HJURPQ8NCD3 748 aaPredicted RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 NOS1P29475 1434 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 NIPSNAP2O75323 286 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SNRPD2P62316 118 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 RPP30P78346 268 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 TMEM18Q96B42 140 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 TIFAQ96CG3 184 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 MRPL45Q9BRJ2 306 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 WRAP53Q9BUR4 548 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 KLHL9Q9P2J3 617 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 NCK1P16333 377 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 MPSTP25325 297 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ABHD18Q0P651 414 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 PCBP1Q15365 356 aaKnown RBP eCLIP6.43□□□□□ -1.384e-20■□□□□ 8.2
UBR4-204ENST00000375254 ZBTB37Q5TC79 503 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 KCNJ9Q92806 393 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SLC25A31Q9H0C2 315 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 DTLQ9NZJ0 730 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 TRAV6A0A075B6T7 132 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SIGLEC6O43699 453 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 RAF1P04049 648 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 UBL4AP11441 157 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 CPN1P15169 458 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SCARB1Q8WTV0 552 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 SLC5A11Q8WWX8 675 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 LRCH3Q96II8 777 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 IMP3Q9NV31 184 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 BET1LQ9NYM9 111 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ARPC5O15511 151 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 RFC2P35250 354 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ACTC1P68032 377 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ACTA1P68133 377 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 PLAG1Q6DJT9 500 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 PHTF2Q8N3S3 785 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 LHFPL5Q8TAF8 219 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 TVP23BQ9NYZ1 205 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 CDK5R2Q13319 367 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 RSU1Q15404 277 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 LPCAT3Q6P1A2 487 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 PXKQ7Z7A4 578 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 DNAAF1Q8NEP3 725 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ELMOD3Q96FG2 381 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 BARD1Q99728 777 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 POLR1EQ9GZS1 481 aaKnown RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 AKTIPQ9H8T0 292 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 KCNS2Q9ULS6 477 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 TEX13DA0A0J9YY54 714 aaPredicted RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 TLX3O43711 291 aaPredicted RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 ERCC1P07992 297 aaPredicted RBP6.43□□□□□ -1.38
UBR4-204ENST00000375254 MAGEA11P43364 429 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 ZNF792Q3KQV3 632 aa6.43□□□□□ -1.38
UBR4-204ENST00000375254 KDELC1Q6UW63 502 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms