RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 COPG1Q9Y678 874 aaKnown RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 HELZP42694 1942 aaKnown RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 LOC100653049A0A140TA62 436 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ILVBLA1L0T0 632 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CCDC162PA2VCL2 907 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 MAGEA13PA6NCF6 341 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 NEMP2A6NFY4 417 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 TMEM233B4DJY2 109 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 H3BNC9 293 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 AIM2O14862 343 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CD3EAPO15446 510 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 SMIM24O75264 130 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CLDN11O75508 207 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 RNASEH2AO75792 299 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 ZMPSTE24O75844 475 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 KRT34O76011 436 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 BAG2O95816 211 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 GLP2RO95838 553 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 TBX18O95935 607 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 GOT2P00505 430 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 FGF4P08620 206 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 SERPINF2P08697 491 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CCDC166P0CW27 439 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CD1DP15813 335 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ATF6P18850 670 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 IMPDH1P20839 514 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CD9P21926 228 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 KCNA5P22460 613 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ME2P23368 584 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 OR1E1P30953 314 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ACADVLP49748 655 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ZNF140P52738 457 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 STC1P52823 247 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 PGGT1BP53609 377 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CDKN2DP55273 166 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CDH4P55283 916 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 GNA12Q03113 381 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 STX5Q13190 355 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ZIK1Q3SY52 487 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 PPM1LQ5SGD2 360 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ZNF678Q5SXM1 525 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 OGFRL1Q5TC84 451 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 IRAK1BP1Q5VVH5 260 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 TMEM198Q66K66 360 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CAPRIN2Q6IMN6 1127 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 SLC8B1Q6J4K2 584 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ZNF549Q6P9A3 640 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 AFTPHQ6ULP2 937 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 TMEM207Q6UWW9 146 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 HACD2Q6Y1H2 254 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 PTAR1Q7Z6K3 402 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 ISCA2Q86U28 154 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CUZD1Q86UP6 607 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 HPS6Q86YV9 775 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 RNF168Q8IYW5 571 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 LRRC43Q8N309 656 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 SLC15A4Q8N697 577 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CCNYL1Q8N7R7 359 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 NAXEQ8NCW5 288 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CATSPER1Q8NEC5 780 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 RHEBL1Q8TAI7 183 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 AGR3Q8TD06 166 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 SLC26A7Q8TE54 656 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ANKRD49Q8WVL7 239 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 XAGE5Q8WWM1 108 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 PYDC1Q8WXC3 89 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 SEPT8Q92599 483 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 TOP1MTQ969P6 601 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 RPL36ALQ969Q0 106 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 TRIM63Q969Q1 353 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 CCDC124Q96CT7 223 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 RCN3Q96D15 328 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 RSPRY1Q96DX4 576 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 DAZAP1Q96EP5 407 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 DNAJC1Q96KC8 554 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 CATSPER2Q96P56 530 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 BTBD9Q96Q07 612 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 PSKH2Q96QS6 385 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 SEPT5Q99719 369 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 SHCBP1LQ9BZQ2 653 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 KLHL4Q9C0H6 718 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 VCXQ9H320 206 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 TFB2MQ9H5Q4 396 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 CWH43Q9H720 699 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 EFCAB1Q9HAE3 211 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 MRPL40Q9NQ50 206 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 SPATS2LQ9NUQ6 558 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 NLE1Q9NVX2 485 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 C6orf203Q9P0P8 240 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 MARCH4Q9P2E8 410 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 PDP2Q9P2J9 529 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 MTRRQ9UBK8 725 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 UBA2Q9UBT2 640 aaPredicted RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 ABT1Q9ULW3 272 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 TMCO1Q9UM00 188 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 BTBD3Q9Y2F9 522 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 MRPS17Q9Y2R5 130 aaKnown RBP4.68□□□□□ -1.66
USP48-202ENST00000374730 PCDHB7Q9Y5E2 793 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 ANKRD12Q6UB98 2062 aa4.68□□□□□ -1.66
USP48-202ENST00000374730 BRCA2P51587 3418 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms