RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 ATG9BQ674R7 924 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 SLCO4C1Q6ZQN7 724 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 ARHGEF39Q8N4T4 335 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 DTWD1Q8N5C7 304 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 ZNF740Q8NDX6 193 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 ZCCHC10Q8TBK6 192 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 UBTD2Q8WUN7 234 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 UBLCP1Q8WVY7 318 aaPredicted RBP11.43□□□□□ -0.58
HDAC8-201ENST00000373554 ESAMQ96AP7 390 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 TM4SF19Q96DZ7 209 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 MMABQ96EY8 250 aaPredicted RBP11.43□□□□□ -0.58
HDAC8-201ENST00000373554 IP6K3Q96PC2 410 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 YIPF2Q9BWQ6 316 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 EHD1Q9H4M9 534 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 ANKZF1Q9H8Y5 726 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 PSMC3IPQ9P2W1 217 aaPredicted RBP11.43□□□□□ -0.58
HDAC8-201ENST00000373554 ZFP69BQ9UJL9 534 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 TUBD1Q9UJT1 453 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 FER1L5A0AVI2 2057 aa11.43□□□□□ -0.58
HDAC8-201ENST00000373554 ARGFXA6NJG6 315 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 H0YIG0 161 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 MKRN2OSH3BPM6 223 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 PEX12O00623 359 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 RFPL1O75677 317 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 NSA2O95478 260 aaKnown RBP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 C1GALT1C1LP0DN25 315 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 COL6A2P12110 1019 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 VARSP26640 1264 aaKnown RBP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 GSTM2P28161 218 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 RRADP55042 308 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 SKP1P63208 163 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 KCNAB2Q13303 367 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 SLBPQ14493 270 aaKnown RBP eCLIP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 RBBP5Q15291 538 aaKnown RBP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 TECRLQ5HYJ1 363 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 TMEM214Q6NUQ4 689 aaKnown RBP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 ADGRD1Q6QNK2 874 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 MRGPREQ86SM8 312 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 APLFQ8IW19 511 aaPredicted RBP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 KRT78Q8N1N4 520 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 KCT2Q8NC54 265 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 TRPV3Q8NET8 790 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 TTLQ8NG68 377 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 OR9A4Q8NGU2 314 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 STT3BQ8TCJ2 826 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 NACC2Q96BF6 587 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 MIEF2Q96C03 454 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 SCYL1Q96KG9 808 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 SPSB2Q99619 263 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 MACROD1Q9BQ69 325 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 CRB3Q9BUF7 120 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 CD244Q9BZW8 370 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 SPNS1Q9H2V7 528 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 EPB41L4BQ9H329 900 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 SOX17Q9H6I2 414 aaPredicted RBP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 ANKHQ9HCJ1 492 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 MKKSQ9NPJ1 570 aaPredicted RBP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 ACSS2Q9NR19 701 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 C14orf105Q9NVL8 296 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 GEMIN8Q9NWZ8 242 aaKnown RBP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 OPTCQ9UBM4 332 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 TRPC4Q9UBN4 977 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 MRPS2Q9Y399 296 aaKnown RBP11.42□□□□□ -0.58
HDAC8-201ENST00000373554 MAP4K5Q9Y4K4 846 aa11.42□□□□□ -0.58
HDAC8-201ENST00000373554 MDC1Q14676 2089 aaKnown RBP11.41□□□□□ -0.58
HDAC8-201ENST00000373554 IGLV3-12A0A075B6K2 115 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 URADA6NGE7 173 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 VSTM2BA6NLU5 285 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 K7EPI3 171 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 FOXS1O43638 330 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 IGHEP01854 428 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 UMODP07911 640 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 RBP1P09455 135 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 ZGLP1P0C6A0 271 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 MTHFD2P13995 350 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 IL1RNP18510 177 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 MMP11P24347 488 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 GCAP28676 217 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 AGTR2P50052 363 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 ALDH18A1P54886 795 aaKnown RBP11.41□□□□□ -0.58
HDAC8-201ENST00000373554 FOXL2P58012 376 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 VSNL1P62760 191 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 IRF8Q02556 426 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 ATP1A4Q13733 1029 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 NAA30Q147X3 362 aaPredicted RBP11.41□□□□□ -0.58
HDAC8-201ENST00000373554 HERC3Q15034 1050 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 SETDB1Q15047 1291 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 PFKFB4Q16877 469 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 XKR6Q5GH73 641 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 PAGE2BQ5JRK9 111 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 CPZQ66K79 652 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 NIPAL1Q6NVV3 410 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 TMIGD1Q6UXZ0 262 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 SHISA6Q6ZSJ9 500 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 MED25Q71SY5 747 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 ABHD13Q7L211 337 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 PLD6Q8N2A8 252 aaKnown RBP11.41□□□□□ -0.58
HDAC8-201ENST00000373554 AMER3Q8N944 861 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 EXD3Q8N9H8 876 aa11.41□□□□□ -0.58
HDAC8-201ENST00000373554 TMEM102Q8N9M5 508 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms