RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 SLC17A9Q9BYT1 436 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 MAGIXQ9H6Y5 334 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 CAAP1Q9H8G2 361 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 TPT1P8Q9HAU6 139 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 LMCD1Q9NZU5 365 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 MYRFQ9Y2G1 1151 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 PCDHB11Q9Y5F2 797 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 GNGT2O14610 69 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 PLRG1O43660 514 aaKnown RBP17.18■□□□□ 0.34
CTSA-204ENST00000372484 CCNDBP1O95273 360 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 KCNK5O95279 499 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 FUCA1P04066 466 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 TFAP2AP05549 437 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 PABPC4LP0CB38 370 aaKnown RBP17.18■□□□□ 0.34
CTSA-204ENST00000372484 MYF6P23409 242 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 RBBP5Q15291 538 aaKnown RBP17.18■□□□□ 0.34
CTSA-204ENST00000372484 IER5LQ5T953 404 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 KIAA1161Q6NSJ0 714 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 DUS1LQ6P1R4 473 aaKnown RBP17.18■□□□□ 0.34
CTSA-204ENST00000372484 ZDHHC13Q8IUH4 622 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 DHRSXQ8N5I4 330 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 WDR48Q8TAF3 677 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■□□ 18.8
CTSA-204ENST00000372484 RMND5BQ96G75 393 aaPredicted RBP17.18■□□□□ 0.34
CTSA-204ENST00000372484 REEP4Q9H6H4 257 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 EXO1Q9UQ84 846 aaKnown RBP17.18■□□□□ 0.34
CTSA-204ENST00000372484 WDR37Q9Y2I8 494 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 TSC22D4Q9Y3Q8 395 aa17.18■□□□□ 0.34
CTSA-204ENST00000372484 A0A1B0GTW7 788 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 LATO43561 262 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 SNAP29O95721 258 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 IL1RNP18510 177 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 PTX3P26022 381 aaPredicted RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 ARSFP54793 590 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 VMACQ2NL98 169 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 LRRC23Q53EV4 343 aaPredicted RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 CYBRD1Q53TN4 286 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 STK32CQ86UX6 486 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 CLEC4FQ8N1N0 589 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 METTL4Q8N3J2 472 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 SDCCAG3Q96C92 435 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 PYURFQ96I23 114 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 C12orf66Q96MD2 445 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 GABRG3Q99928 467 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 CD320Q9NPF0 282 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 ATP6V1HQ9UI12 483 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3DA0A087WVF3 549 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3IA0A087WXS9 549 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3EA0A087X179 549 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3KA0A087X1G2 549 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3FA6NER0 549 aaPredicted RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3LB9A6J9 549 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 G3V2T6 193 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 H3BNH8 94 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 RNASET2O00584 256 aaKnown RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 RNGTTO60942 597 aaKnown RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 KLK1P06870 262 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3HP0C7X1 549 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 MAT2AP31153 395 aaKnown RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 CAPGP40121 348 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 ALDH3A2P51648 485 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 VAC14Q08AM6 782 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 DMPKQ09013 629 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 APOFQ13790 326 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TMEM259Q4ZIN3 620 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3GQ6DHY5 549 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3CQ6IPX1 549 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 ERICH5Q6P6B1 374 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 VN1R5Q7Z5H4 357 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TBC1D3Q8IZP1 549 aaPredicted RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 IL17RCQ8NAC3 791 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 TSPAN14Q8NG11 270 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 OR10Q1Q8NGQ4 319 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 SMPDL3AQ92484 453 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 FBXL20Q96IG2 436 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 PHF12Q96QT6 1004 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 FERD3LQ96RJ6 166 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 MENTQ9BUN1 341 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 C1QTNF7Q9BXJ2 289 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 BHLHE41Q9C0J9 482 aaPredicted RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 ATAD3AQ9NVI7 634 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 CLDND1Q9NY35 253 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 MOSPD1Q9UJG1 213 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 PADI4Q9UM07 663 aa17.17■□□□□ 0.34
CTSA-204ENST00000372484 SAMD4AQ9UPU9 718 aaKnown RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 MAGED1Q9Y5V3 778 aaPredicted RBP17.17■□□□□ 0.34
CTSA-204ENST00000372484 ZNF682O95780 498 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 ABCB1P08183 1280 aaPredicted RBP17.16■□□□□ 0.34
CTSA-204ENST00000372484 HOXB2P14652 356 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 HOXB6P17509 224 aaKnown RBP17.16■□□□□ 0.34
CTSA-204ENST00000372484 CTHP32929 405 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 IST1P53990 364 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 ADPRHP54922 357 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 TAS2R50P59544 299 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 LRRC74AQ0VAA2 488 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 ZNF385BQ569K4 471 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 CPZQ66K79 652 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 GPR155Q7Z3F1 870 aa17.16■□□□□ 0.34
CTSA-204ENST00000372484 R3HCC1LQ7Z5L2 792 aaKnown RBP17.16■□□□□ 0.34
CTSA-204ENST00000372484 ZZZ3Q8IYH5 903 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms