RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 RTP2Q5QGT7 225 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 SYCE2Q6PIF2 218 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 TMEM17Q86X19 198 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 DMRTB1Q96MA1 342 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF347Q96SE7 839 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 CDCA3Q99618 268 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 ITM2CQ9NQX7 267 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 ALG5Q9Y673 324 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 NUP98P52948 1817 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 PKD1L3Q7Z443 1732 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 hCG_2039718K7EN88 272 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 IFNA6P05013 189 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 CTSAP10619 480 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 HNF1AP20823 631 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 CDH12P55289 794 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 EEFSECP57772 596 aaKnown RBP12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 GALNT2Q10471 571 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 GTF2H5Q6ZYL4 71 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 USP30Q70CQ3 517 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 NAT8LQ8N9F0 302 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLC22A4Q9H015 551 aa12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 C8orf33Q9H7E9 229 aaPredicted RBP12.94□□□□□ -0.34
RAPGEF1-201ENST00000372189 LAMTOR5O43504 91 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 CLEC3BP05452 202 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 PCDH1Q08174 1060 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 KLHL26Q53HC5 615 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 CYP2U1Q7Z449 544 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 TERB2Q8NHR7 220 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 STOML3Q8TAV4 291 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZFAND2BQ8WV99 257 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 SHISA4Q96DD7 197 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 GFM1Q96RP9 751 aaKnown RBP12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 ANKRA2Q9H9E1 313 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 ELL3Q9HB65 397 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 BIN3Q9NQY0 253 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 PPM1HQ9ULR3 514 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 ERVK-11Q9UQG0 969 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 POP7O75817 140 aaKnown RBP12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 MXD1Q05195 221 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 HSPB3Q12988 150 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 PDSS2Q86YH6 399 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 CPNE8Q86YQ8 564 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLC35B2Q8TB61 432 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLC13A3Q8WWT9 602 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 UFD1Q92890 307 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 PAAF1Q9BRP4 392 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 WDR6Q9NNW5 1121 aaKnown RBP12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 BTAF1O14981 1849 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 MAGEB17A8MXT2 336 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 TAS2R39P59534 338 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 IFI44LQ53G44 452 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 OGFRL1Q5TC84 451 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 MRPL10Q7Z7H8 261 aaKnown RBP12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLC38A4Q969I6 547 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 LRRC3Q9BY71 257 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 SLC39A1Q9NY26 324 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 ACAD8Q9UKU7 415 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 ICKQ9UPZ9 632 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 NWD2Q9ULI1 1742 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 K7EPI3 171 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 KLF11O14901 512 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 CBSLP0DN79 551 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 CBSP35520 551 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 MYBPC3Q14896 1274 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 CST9Q5W186 159 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 TXNRD3NBQ6F5E7 133 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 LRRC69Q6ZNQ3 347 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 RASGEF1AQ8N9B8 481 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 TMEM98Q9Y2Y6 226 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 TESMINQ9Y4I5 508 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 YES1P07947 543 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 HOXA11P31270 313 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 GRIA2P42262 883 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 ALDH3A2P51648 485 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 PITPNAQ00169 270 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 RING1Q06587 406 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF33AQ06730 810 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 NAPRTQ6XQN6 538 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 Q8N9G6 341 aaPredicted RBP12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 PCDHAC1Q9H158 963 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 OXSMQ9NWU1 459 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 LRRC42Q9Y546 428 aa12.93□□□□□ -0.34
RAPGEF1-201ENST00000372189 C2orf78A6NCI8 922 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF840PA6NDX5 716 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 KERAO60938 352 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 NIPSNAP2O75323 286 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 RFPL2O75678 378 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 C8BP07358 591 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 PIM1P11309 404 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 CD36P16671 472 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 GUK1Q16774 197 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 PRAMEF14Q5SWL7 426 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 PRAMEF13Q5VWM6 474 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 JAZF1Q86VZ6 243 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 TMEM40Q8WWA1 233 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 COG8Q96MW5 612 aa12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 ZNF641Q96N77 438 aaPredicted RBP12.92□□□□□ -0.34
RAPGEF1-201ENST00000372189 BEX2Q9BXY8 128 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms