RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 FBXO46Q6PJ61 603 aaPredicted RBP11.31□□□□□ -0.6
PDE6C-201ENST00000371447 THAP5Q7Z6K1 395 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 PACRGLQ8N7B6 248 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 ATL1Q8WXF7 558 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 F2RL3Q96RI0 385 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 ASPSCR1Q9BZE9 553 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 MIEF1Q9NQG6 463 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 SERGEFQ9UGK8 458 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 TRPM6Q9BX84 2022 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 GBF1Q92538 1859 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 SLC5A10A0PJK1 596 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 SLC31A1O15431 190 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 PSIP1O75475 530 aaKnown RBP11.31□□□□□ -0.6
PDE6C-201ENST00000371447 KCNK5O95279 499 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 TFPTP0C1Z6 253 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 KDELR2P33947 212 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 HBA1P69905 142 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 BNIP3Q12983 259 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 RAPSNQ13702 412 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 GANABQ14697 944 aaKnown RBP11.31□□□□□ -0.6
PDE6C-201ENST00000371447 VMACQ2NL98 169 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 HNRNPA1L2Q32P51 320 aaKnown RBP11.31□□□□□ -0.6
PDE6C-201ENST00000371447 CCNYL2Q5T2Q4 361 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 TNFAIP8L2Q6P589 184 aaPredicted RBP11.31□□□□□ -0.6
PDE6C-201ENST00000371447 VPS37AQ8NEZ2 397 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 WDR20Q8TBZ3 569 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 GORASP2Q9H8Y8 452 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 CUEDC1Q9NWM3 386 aaPredicted RBP11.31□□□□□ -0.6
PDE6C-201ENST00000371447 FBXO10Q9UK96 956 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 RAB23Q9ULC3 237 aa11.31□□□□□ -0.6
PDE6C-201ENST00000371447 H0YJX3 145 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 SPINT1O43278 529 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 SOD1P00441 154 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 CD247P20963 164 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 FUT4P22083 530 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 PTPN6P29350 595 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 SLC19A1P41440 591 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 ARHGDIAP52565 204 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 WNT3P56703 355 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 TAP2Q03519 686 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 ABHD18Q0P651 414 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 DMC1Q14565 340 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 LIPJQ5W064 366 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 GPR149Q86SP6 731 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 CYP4Z1Q86W10 505 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 YAF2Q8IY57 180 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 TFGQ92734 400 aaPredicted RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 LOC100130705A0A1B0GUX0 176 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 PIPSLA2A3N6 862 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 OR52A4PA6NMU1 304 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 PDZK1P1A8MUH7 402 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 TOR1BO14657 336 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 NOL3O60936 208 aaKnown RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 ASLP04424 464 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 MATN1P21941 496 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 POU1F1P28069 291 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 P2RY2P41231 377 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 MAP2K4P45985 399 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 PRKAG1P54619 331 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 RAE1P78406 368 aaKnown RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 HSPB3Q12988 150 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 SP140Q13342 867 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 ATG9BQ674R7 924 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 SLCO4C1Q6ZQN7 724 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 RAB8BQ92930 207 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 FAM129BQ96TA1 746 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 CCDC177Q9NQR7 707 aaPredicted RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 BLOC1S6Q9UL45 172 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 IRAK3Q9Y616 596 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 BCKDKO14874 412 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 DDX6P26196 483 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 IDH2P48735 452 aaKnown RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 ENTPD1P49961 510 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 ADARB1P78563 741 aaKnown RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 ELAVL3Q14576 367 aaKnown RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 HIST2H2ACQ16777 129 aaPredicted RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 HIST2H2AA3Q6FI13 130 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 ERN2Q76MJ5 926 aaKnown RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 RNF130Q86XS8 419 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 PAPD5Q8NDF8 572 aaKnown RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 OR9A1PQ8NGU1 263 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 HM13Q8TCT9 377 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 DOK4Q8TEW6 326 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 UCN3Q969E3 161 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 EXOSC8Q96B26 276 aaKnown RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 PPCDCQ96CD2 204 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 KCNC2Q96PR1 638 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 MBOAT4Q96T53 435 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 SLC35A5Q9BS91 424 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 MBNL1Q9NR56 388 aaKnown RBP11.3□□□□□ -0.6
PDE6C-201ENST00000371447 CTPS2Q9NRF8 586 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
PDE6C-201ENST00000371447 J3KTA2 159 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 PRKRAO75569 313 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 IL3P08700 152 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 EPHA5P54756 1037 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 SRSF11Q05519 484 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 DYNC1I2Q13409 638 aaKnown RBP11.29□□□□□ -0.6
PDE6C-201ENST00000371447 AMZ2Q86W34 360 aa11.29□□□□□ -0.6
PDE6C-201ENST00000371447 NFKBIDQ8NI38 313 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms