RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 WDR91A4D1P6 747 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 E2F3O00716 465 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 TXNDC9O14530 226 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 OR1F1O43749 312 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 LCMT2O60294 686 aaKnown RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 DLX3O60479 287 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 RAD1O60671 282 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 KATNA1O75449 491 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 BCL6P41182 706 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 ARSFP54793 590 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 CORO7P57737 925 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 IRF8Q02556 426 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 GTF2H2Q13888 395 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 SLBPQ14493 270 aaKnown RBP eCLIP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 TBCCQ15814 346 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 YOD1Q5VVQ6 348 aaPredicted RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 ATG16L1Q676U5 607 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 GTF2H2CQ6P1K8 395 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 ZYG11AQ6WRX3 759 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 SLC22A9Q8IVM8 553 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 NLGN4XQ8N0W4 816 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 ESX1Q8N693 406 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 CCDC63Q8NA47 563 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 MFSD9Q8NBP5 474 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 SLC38A9Q8NBW4 561 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 ZNF740Q8NDX6 193 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 NLGN4YQ8NFZ3 816 aaPredicted RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 RDH11Q8TC12 318 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 CCDC126Q96EE4 140 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 WDR34Q96EX3 536 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PTCD3Q96EY7 689 aaKnown RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 LRFN5Q96NI6 719 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 EFCAB11Q9BUY7 163 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 SPNS1Q9H2V7 528 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 GEMIN8Q9NWZ8 242 aaKnown RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PRDM4Q9UKN5 801 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 RAXQ9Y2V3 346 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 URB1O60287 2271 aaKnown RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 TEX51A0A1B0GUA7 166 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 RRP8O43159 456 aaKnown RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PRAMEF4O60810 478 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 RPS17P08708 135 aaKnown RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 CCNYL3P0C7X3 344 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 TROVE2P10155 538 aaKnown RBP eCLIP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 MYL2P10916 166 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 EIF2S3P41091 472 aaKnown RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 CASP2P42575 452 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 SCTRP47872 440 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 HERVK_113P63132 956 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PCDH1Q08174 1060 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 CHIT1Q13231 466 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 DOC2AQ14183 400 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PRTGQ2VWP7 1150 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 FAM214AQ32MH5 1076 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PAGE2BQ5JRK9 111 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PRAMEF9Q5VWM5 478 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 RHBDD2Q6NTF9 364 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 GOLGA7Q7Z5G4 137 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 VN1R4Q7Z5H5 301 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 KRT78Q8N1N4 520 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 GBP7Q8N8V2 638 aaPredicted RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 CAMKVQ8NCB2 501 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 ARMC2Q8NEN0 867 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 NKD1Q969G9 470 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 NAF1Q96HR8 494 aaKnown RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 C1QTNF3Q9BXJ4 246 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 ERVK-6Q9BXR3 956 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 NLNQ9BYT8 704 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 DPH1Q9BZG8 443 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PITHD1Q9GZP4 211 aaPredicted RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 C12orf65Q9H3J6 166 aaKnown RBP15.2■□□□□ 0.02
PFDN4-201ENST00000371419 CUTCQ9NTM9 273 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 TXLNGQ9NUQ3 528 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 MID2Q9UJV3 735 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PCTPQ9UKL6 214 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 PADI1Q9ULC6 663 aa15.2■□□□□ 0.02
PFDN4-201ENST00000371419 CELSR3Q9NYQ7 3312 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 HYKKA2RU49 373 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 G3V2L1 256 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 MEN1O00255 615 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 TAF4O00268 1085 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 WFS1O76024 890 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 KLK3P07288 261 aaPredicted RBP15.19■□□□□ 0.02
PFDN4-201ENST00000371419 ALDH3A1P30838 453 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 RORAP35398 523 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 AHRP35869 848 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 GCGRP47871 477 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 PRKAA2P54646 552 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 EMP3P54852 163 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 CLN3Q13286 438 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 LAPTM5Q13571 262 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 E2F2Q14209 437 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 RBBP5Q15291 538 aaKnown RBP15.19■□□□□ 0.02
PFDN4-201ENST00000371419 TGIF1Q15583 401 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 HKDC1Q2TB90 917 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 LACTB2Q53H82 288 aaPredicted RBP15.19■□□□□ 0.02
PFDN4-201ENST00000371419 TMIGD1Q6UXZ0 262 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 TRPM8Q7Z2W7 1104 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 ASPGQ86U10 573 aa15.19■□□□□ 0.02
PFDN4-201ENST00000371419 NUDCD3Q8IVD9 361 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms