RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 EPGNQ6UW88 154 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 ZNF572Q7Z3I7 529 aaPredicted RBP21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 TMEM17Q86X19 198 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 EPYCQ99645 322 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 DERL2Q9GZP9 239 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 TMED5Q9Y3A6 229 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 WASHC1A8K0Z3 465 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 WASH3PC4AMC7 463 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 E7EQ34 232 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 CNTN5O94779 1100 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 PREPP48147 710 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 PRMT2P55345 433 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 ZNF776Q68DI1 518 aaPredicted RBP21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 C22orf39Q6P5X5 142 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 WASH2PQ6VEQ5 465 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 PSKH2Q96QS6 385 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 CAPN14A8MX76 684 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 INPPL1O15357 1258 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 S100A1P23297 94 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 BMP8BP34820 402 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 SLC11A1P49279 550 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 APLP1P51693 650 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 BMP8AQ7Z5Y6 402 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 GIMAP2Q9UG22 337 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 ENTPD6O75354 484 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 KAT7O95251 611 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 PRKACGP22612 351 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 CBLP22681 906 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 PAFAH1B3Q15102 231 aaKnown RBP21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 THOC7Q6I9Y2 204 aaKnown RBP21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 CFL2Q9Y281 166 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 TEX264Q9Y6I9 313 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 TLX2O43763 284 aaPredicted RBP21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 ZNF30P17039 623 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 ID2Q02363 134 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 LAPTM4AQ15012 233 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 AGTRAPQ6RW13 159 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 TMEM156Q8N614 296 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 CCDC107Q8WV48 283 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 GPR22Q99680 433 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 H0YGN5 161 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 CREG1O75629 220 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 BNIP3Q12983 259 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 SPIN3Q5JUX0 258 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 DNM1P34Q6PK57 102 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 SNX29P2Q8IUI4 249 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 SMOQ99835 787 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 SLIT2O94813 1529 aa21.49■■□□□ 1.03
TM9SF3-201ENST00000371142 KANTRA0A1W2PQU2 76 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 KDM4BO94953 1096 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 CSTBP04080 98 aaKnown RBP21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 MLLT6P55198 1093 aaPredicted RBP21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 PLCZ1Q86YW0 608 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 CILP2Q8IUL8 1156 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 SLCO2A1Q92959 643 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 HERC2P3Q9BVR0 1158 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 PCDHB11Q9Y5F2 797 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 TYRP1P17643 537 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 ZMYND11Q15326 602 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 DECR1Q16698 335 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.48■■□□□ 1.031e-6■■■■□ 25.2
TM9SF3-201ENST00000371142 SPANXN4Q5MJ08 99 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 ALPK1Q96QP1 1244 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 NSUN3Q9H649 340 aaKnown RBP21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 C14orf105Q9NVL8 296 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 NOX1Q9Y5S8 564 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 SMIM30A4D0T7 59 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 MATN2O00339 956 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 CHRM1P11229 460 aaPredicted RBP21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 HOXB2P14652 356 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 ST3GAL3Q11203 375 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 TMEM164Q5U3C3 297 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 TMIGD1Q6UXZ0 262 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 TTTY10Q9BZA0 68 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 FBXO9Q9UK97 447 aaPredicted RBP21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 PLEKHA6Q9Y2H5 1048 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 GLOD5A6NK44 160 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 TTC34A8MYJ7 566 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 GATMP50440 423 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 MEF2AQ02078 507 aaPredicted RBP21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 INO80EQ8NBZ0 244 aaPredicted RBP21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 BPIFB1Q8TDL5 484 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 BIRC7Q96CA5 298 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 METTL7AQ9H8H3 244 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 NKX1-2Q9UD57 310 aaPredicted RBP21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 RNF130Q86XS8 419 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 TICAM1Q8IUC6 712 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 TPT1P8Q9HAU6 139 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 TRIM36Q9NQ86 728 aa21.48■■□□□ 1.03
TM9SF3-201ENST00000371142 EIF2S3P41091 472 aaKnown RBP21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 SEZ6LQ9BYH1 1024 aa21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 ZBTB26Q9HCK0 441 aa21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 AOC2O75106 756 aa21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 CDRT1O95170 752 aa21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 OAS1P00973 400 aaKnown RBP21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 NRIP1P48552 1158 aa21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 RABL3Q5HYI8 236 aa21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 LRP10Q7Z4F1 713 aa21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 NPAS3Q8IXF0 933 aa21.47■■□□□ 1.03
TM9SF3-201ENST00000371142 FNIP2Q9P278 1114 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms