RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 RHCGQ9UBD6 479 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 ZNF451Q9Y4E5 1061 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 LINC00854A0A1B0GVQ3 168 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 EEDO75530 441 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 SERPINB7O75635 380 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 MATN4O95460 622 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 CLDN8P56748 225 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 BTN3A2P78410 334 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 GSTM4Q03013 218 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 ABHD18Q0P651 414 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 AMZ1Q400G9 498 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 C5orf22Q49AR2 442 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 ENPP6Q6UWR7 440 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 CEACAM20Q6UY09 585 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 EIF3MQ7L2H7 374 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 COMMD6Q7Z4G1 85 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 RNF130Q86XS8 419 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 TMEM151AQ8N4L1 468 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 FAM81AQ8TBF8 368 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 DACT3Q96B18 629 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 CFHR5Q9BXR6 569 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 MUC13Q9H3R2 512 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 PRSS16Q9NQE7 514 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 TMED5Q9Y3A6 229 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 TPRKBQ9Y3C4 175 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 MAGED1Q9Y5V3 778 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 PNMA8CA0A1B0GUJ8 204 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 PIPSLA2A3N6 862 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 URADA6NGE7 173 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 LINC01565O15544 149 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 VEGFDO43915 354 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 ADH1BP00325 375 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 BCHEP06276 602 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 MMP12P39900 470 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 NUP107P57740 925 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 FBXW4P57775 412 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 DYNC1I2Q13409 638 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 SELPLGQ14242 412 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 PRRT3Q5FWE3 981 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 OGFOD2Q6N063 350 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 BHLHB9Q6PI77 547 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 VTCN1Q7Z7D3 282 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 SFTPA1Q8IWL2 248 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 HS3ST5Q8IZT8 346 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 PLA2G15Q8NCC3 412 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 PIK3C3Q8NEB9 887 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 NFKBIDQ8NI38 313 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 ZBED6CLQ96FA7 236 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 PDLIM5Q96HC4 596 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 RBM4BQ9BQ04 359 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 RPP25Q9BUL9 199 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 RBM4Q9BWF3 364 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 PAIP1Q9H074 479 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 RPF2Q9H7B2 306 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 CCM2LQ9NUG4 571 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 DNAJB9Q9UBS3 223 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 ZNF282Q9UDV7 671 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 LYVE1Q9Y5Y7 322 aa6.87□□□□□ -1.31
TGFBR3-202ENST00000370399 BCKDKO14874 412 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 CNOT3O75175 753 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 CTSLP07711 333 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 TNFRSF1BP20333 461 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 C5AR1P21730 350 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 CD9P21926 228 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 CPN2P22792 545 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 TIA1P31483 386 aaKnown RBP eCLIP6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 CTSKP43235 329 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 FOXM1Q08050 763 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 HYAL2Q12891 473 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 SCARB2Q14108 478 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 DAG1Q14118 895 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 LASP1Q14847 261 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 MINDY4Q4G0A6 757 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 TYW3Q6IPR3 259 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 ZNF551Q7Z340 670 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 ZNF438Q7Z4V0 828 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 THAP5Q7Z6K1 395 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 PATL1Q86TB9 770 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 HIPK1Q86Z02 1210 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 CCDC116Q8IYX3 515 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 TMEM125Q96AQ2 219 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 RGMAQ96B86 450 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 ZNF607Q96SK3 696 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 FNDC11Q9BVV2 318 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 PCBD2Q9H0N5 130 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 UTS2RQ9UKP6 389 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 OR10H1Q9Y4A9 318 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 SLC16A5O15375 505 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 GMFGO60234 142 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 OR6B1O95007 311 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 NUDT14O95848 222 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 TSPAN12O95859 305 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 IFNW1P05000 195 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 ETFAP13804 333 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 NOS3P29474 1203 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 INPP1P49441 399 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 CCR3P51677 355 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 SUOXP51687 545 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 CDK3Q00526 305 aa6.86□□□□□ -1.31
TGFBR3-202ENST00000370399 EPS8Q12929 822 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms