RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 C1orf189Q5VU69 101 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 TLDC1Q6P9B6 456 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 FRMD7Q6ZUT3 714 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 GPRIN3Q6ZVF9 776 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 RNF175Q8N4F7 328 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 DTWD1Q8N5C7 304 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 METTL27Q8N6F8 245 aaPredicted RBP13.26□□□□□ -0.29
TPM3-211ENST00000368531 CDYL2Q8N8U2 506 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 KCT2Q8NC54 265 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 CAMKVQ8NCB2 501 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 GALNT6Q8NCL4 622 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 ZCCHC10Q8TBK6 192 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 TEFMQ96QE5 360 aaKnown RBP13.26□□□□□ -0.29
TPM3-211ENST00000368531 ZPBPQ9BS86 351 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 NDC1Q9BTX1 674 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 NTMT1Q9BV86 223 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 NLNQ9BYT8 704 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 NT5DC2Q9H857 520 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 THSD1Q9NS62 852 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 TXLNGQ9NUQ3 528 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 DHCR7Q9UBM7 475 aaKnown RBP13.26□□□□□ -0.29
TPM3-211ENST00000368531 ZFP69BQ9UJL9 534 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 RUVBL1Q9Y265 456 aaKnown RBP13.26□□□□□ -0.29
TPM3-211ENST00000368531 PCDHGA3Q9Y5H0 932 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 AP1M2Q9Y6Q5 423 aa13.26□□□□□ -0.29
TPM3-211ENST00000368531 H3BMH7 237 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 UBFD1O14562 309 aaKnown RBP13.25□□□□□ -0.29
TPM3-211ENST00000368531 BIRC5O15392 142 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 ATP8B1O43520 1251 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 UGDHO60701 494 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 MED26O95402 600 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 AHRP35869 848 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 NEK2P51955 445 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 PPP2R2AP63151 447 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 RGS1Q08116 209 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 PCDH1Q08174 1060 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 LCP2Q13094 533 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 PRTGQ2VWP7 1150 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 TOR1AIP1Q5JTV8 583 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 TTLL10Q6ZVT0 673 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 L3MBTL4Q8NA19 623 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 SLC38A9Q8NBW4 561 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 OR7G3Q8NG95 312 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 UBE2E3Q969T4 207 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 TM4SF19Q96DZ7 209 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 NAF1Q96HR8 494 aaKnown RBP13.25□□□□□ -0.29
TPM3-211ENST00000368531 CNDP1Q96KN2 507 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 ZNF285Q96NJ3 590 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 KCNA7Q96RP8 456 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 ZNF382Q96SR6 550 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 MTERF1Q99551 399 aaKnown RBP13.25□□□□□ -0.29
TPM3-211ENST00000368531 SARGQ9BW04 601 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 CUTCQ9NTM9 273 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 ZNF225Q9UK10 706 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 MRPS2Q9Y399 296 aaKnown RBP13.25□□□□□ -0.29
TPM3-211ENST00000368531 FIS1Q9Y3D6 152 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 TIMM22Q9Y584 194 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 PCDHGA11Q9Y5H2 935 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 SPTBN2O15020 2390 aa13.25□□□□□ -0.29
TPM3-211ENST00000368531 TXNDC9O14530 226 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 NPHS1O60500 1241 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 CPNE3O75131 537 aaKnown RBP13.24□□□□□ -0.29
TPM3-211ENST00000368531 CRCPO75575 148 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 DXOO77932 396 aaKnown RBP13.24□□□□□ -0.29
TPM3-211ENST00000368531 TGFB1P01137 390 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 CAPN1P07384 714 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 CHRNGP07510 517 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 SLC35G6P0C7Q6 338 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 HMOX2P30519 316 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 ATP1A2P50993 1020 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 SLC18A1P54219 525 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 NAA20P61599 178 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 SNRPNP63162 240 aaKnown RBP13.24□□□□□ -0.29
TPM3-211ENST00000368531 GPS2Q13227 327 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 E2F2Q14209 437 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 FAM214AQ32MH5 1076 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 TBC1D25Q3MII6 688 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 ARL13AQ5H913 290 aaPredicted RBP13.24□□□□□ -0.29
TPM3-211ENST00000368531 TCHHL1Q5QJ38 904 aaPredicted RBP13.24□□□□□ -0.29
TPM3-211ENST00000368531 CES4AQ5XG92 561 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 IGF2-ASQ6U949 168 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 TIPARPQ7Z3E1 657 aaKnown RBP13.24□□□□□ -0.29
TPM3-211ENST00000368531 VN1R5Q7Z5H4 357 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 LAS2Q8IYD9 372 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 TRPV3Q8NET8 790 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 TTLQ8NG68 377 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 HUS1BQ8NHY5 278 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 METTL6Q8TCB7 284 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 AGR3Q8TD06 166 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 CREB3L4Q8TEY5 395 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 AGAP11Q8TF27 550 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 GATA6Q92908 595 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 PITHD1Q9GZP4 211 aaPredicted RBP13.24□□□□□ -0.29
TPM3-211ENST00000368531 KLHL31Q9H511 634 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 ZNF395Q9H8N7 513 aaPredicted RBP13.24□□□□□ -0.29
TPM3-211ENST00000368531 TRPS1Q9UHF7 1281 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 STK38LQ9Y2H1 464 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 PCDHB3Q9Y5E6 796 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 PCDHGA7Q9Y5G6 932 aa13.24□□□□□ -0.29
TPM3-211ENST00000368531 A0A0G2JN53 185 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms