RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 SLC44A3Q8N4M1 653 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 MFSD8Q8NHS3 518 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 RFKQ969G6 155 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 MFSD3Q96ES6 412 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 MAP3K3Q99759 626 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 TMEM175Q9BSA9 504 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF700Q9H0M5 742 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 WDR55Q9H6Y2 383 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SLC2A4RGQ9NR83 387 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 TAS2R7Q9NYW3 318 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 NCANO14594 1321 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ABLIM1O14639 778 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SCO2O43819 266 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 AP2A2O94973 939 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 RAB8AP61006 207 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 DCST1Q5T197 706 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 CCDC28AQ8IWP9 274 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 C11orf65Q8NCR3 313 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 MCFD2Q8NI22 146 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 COMMD4Q9H0A8 199 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 DENND2DQ9H6A0 471 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SDHAF3Q9NRP4 125 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ERVK-18Q9QC07 812 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ZMAT5Q9UDW3 170 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 M0QX08 132 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 RFXAPO00287 272 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 CLN5O75503 358 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 HTR2AP28223 471 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ASMTP46597 345 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 LUMP51884 338 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 MXD1Q05195 221 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 FASTKD3Q14CZ7 662 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 CDKAL1Q5VV42 579 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 IRGQQ8WZA9 623 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ZDHHC12Q96GR4 267 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 CCDC74BQ96LY2 380 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 HSPA12BQ96MM6 686 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PCDHB18PQ96TA0 734 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 TCRBV9S1A1TA0A576 114 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ARPC2O15144 300 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 HLA-DQB2P05538 268 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 AOC1P19801 751 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ACADVLP49748 655 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ATP6V0D1P61421 351 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 NKX6-1P78426 367 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 NFE2L1Q14494 772 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 DEFB133Q30KQ1 61 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PLEKHN1Q494U1 663 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PERM1Q5SV97 790 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PRAMEF14Q5SWL7 426 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PRAMEF13Q5VWM6 474 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF767PQ75MW2 155 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SLC41A3Q96GZ6 507 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 CNDP2Q96KP4 475 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 KCNK13Q9HB14 408 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 MAGEE1Q9HCI5 957 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 FBRSL1Q9HCM7 1045 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SLC17A7Q9P2U7 560 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 MYO7AQ13402 2215 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 hCG_1807616A0A1W2PRN6 198 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 NOTOA8MTQ0 251 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 NSG1P42857 185 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 TSPAN5P62079 268 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 RPS15P62841 145 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ST3GAL4Q11206 333 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PTPRCAPQ14761 206 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 VASH1Q7L8A9 365 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SSX6Q7RTT6 188 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PIM3Q86V86 326 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 TMEM130Q8N3G9 435 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 C1orf216Q8TAB5 229 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 HM13Q8TCT9 377 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 BORCS8Q96FH0 119 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PCBD2Q9H0N5 130 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 TBC1D17Q9HA65 648 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 EIF2B3Q9NR50 452 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ZSCAN5BA6NJL1 495 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 MPZL2O60487 215 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 POP7O75817 140 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 UROSP10746 265 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ASPAP45381 313 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 KHKP50053 298 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 RAB28P51157 221 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 DAOAP59103 153 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 EEF1A1P68104 462 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ARG2P78540 354 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 NTHL1P78549 312 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF45Q02386 682 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 EIF2B1Q14232 305 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SOWAHAQ2M3V2 549 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 EEF1A1P5Q5VTE0 462 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 CLEC20AQ6ZU45 233 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 C15orf52Q6ZUT6 534 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SYVN1Q86TM6 617 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PNLDC1Q8NA58 520 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PIGXQ8TBF5 258 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 TFAP2BQ92481 460 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 RRNAD1Q96FB5 475 aaKnown RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 COPS4Q9BT78 406 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SLC22A14Q9Y267 594 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms