RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 NEDD8-MDP1E9PL57 170 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 OR7A17O14581 309 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 COCHO43405 550 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 DYRK3O43781 588 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 UPK1BO75841 260 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 PRAMEF12O95522 483 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 KLK1P06870 262 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 ANXA8P13928 327 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 ISL1P61371 349 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 TUBA1BP68363 451 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 PPIGQ13427 754 aaKnown RBP eCLIP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 TUBA1AQ71U36 451 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 VN1R5Q7Z5H4 357 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 LAPTM4BQ86VI4 370 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 TSPYL5Q86VY4 417 aaPredicted RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 MEX3DQ86XN8 651 aaKnown RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 RNF130Q86XS8 419 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 RHOXF1Q8NHV9 184 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 TBX5Q99593 518 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 MROQ9BYG7 248 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 FAM83DQ9H4H8 585 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 MOV10Q9HCE1 1003 aaKnown RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 ABCB8Q9NUT2 735 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 ENOPH1Q9UHY7 261 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 LAMA3Q16787 3333 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 NME6O75414 186 aaPredicted RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 CAPNS1P04632 268 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 ALPPL2P10696 532 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 PIM1P11309 404 aaPredicted RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 SDC1P18827 310 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 CA5AP35218 305 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 SOX3P41225 446 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 RPS13P62277 151 aaKnown RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 CDK6Q00534 326 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 SPATS1Q496A3 300 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 PTRH1Q86Y79 214 aaKnown RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 NAGSQ8N159 534 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 PAPD5Q8NDF8 572 aaKnown RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 SMG9Q9H0W8 520 aaKnown RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 TLR9Q9NR96 1032 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 COQ3Q9NZJ6 369 aa13.21□□□□□ -0.29
SGMS1-202ENST00000361781 CFAP20Q9Y6A4 193 aaKnown RBP13.21□□□□□ -0.29
SGMS1-202ENST00000361781 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.21□□□□□ -0.3
SGMS1-202ENST00000361781 TCRBV5S2A0A599 114 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 C2orf78A6NCI8 922 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 SNTNA6NMZ2 147 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 BTN3A3O00478 584 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 DLGAP1O14490 977 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 SMAD6O43541 496 aaKnown RBP13.21□□□□□ -0.3
SGMS1-202ENST00000361781 CLDN8P56748 225 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 SDE2Q6IQ49 451 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 MZT2BQ6NZ67 158 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 SHQ1Q6PI26 577 aaKnown RBP13.21□□□□□ -0.3
SGMS1-202ENST00000361781 CMTM8Q8IZV2 173 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 NXPE1Q8N323 547 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 PIK3R3Q92569 461 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 DNASE1L2Q92874 299 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 NECTIN4Q96NY8 510 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 BRINP2Q9C0B6 783 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 IL26Q9NPH9 171 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 THG1LQ9NWX6 298 aaKnown RBP13.21□□□□□ -0.3
SGMS1-202ENST00000361781 ZNF225Q9UK10 706 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 CDH7Q9ULB5 785 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 CLCA2Q9UQC9 943 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 HSPB11Q9Y547 144 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 PCDHGA3Q9Y5H0 932 aa13.21□□□□□ -0.3
SGMS1-202ENST00000361781 BCHEP06276 602 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 FAM163BP0C2L3 166 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 LIPAP38571 399 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 PSMD8P48556 350 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 RAB14P61106 215 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 SPRYD7Q5W111 196 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 ERAP2Q6P179 960 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 Q6ZVL8 140 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 PRSS48Q7RTY5 328 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 ZNF467Q7Z7K2 595 aaPredicted RBP13.2□□□□□ -0.3
SGMS1-202ENST00000361781 ASCC1Q8N9N2 400 aaKnown RBP13.2□□□□□ -0.3
SGMS1-202ENST00000361781 KCNN1Q92952 543 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 ITPKCQ96DU7 683 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 CCM2Q9BSQ5 444 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 BEX1Q9HBH7 125 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 NUFIP1Q9UHK0 495 aaKnown RBP13.2□□□□□ -0.3
SGMS1-202ENST00000361781 SNX7Q9UNH6 387 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 A0A1W2PQ72 361 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 WNT9AO14904 365 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 SEPT4O43236 478 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 UGT2B17O75795 530 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 PPIBP23284 216 aaKnown RBP13.2□□□□□ -0.3
SGMS1-202ENST00000361781 RORCP51449 518 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 POLR2LP62875 67 aaKnown RBP13.2□□□□□ -0.3
SGMS1-202ENST00000361781 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
SGMS1-202ENST00000361781 HNRNPA0Q13151 305 aaKnown RBP13.2□□□□□ -0.3
SGMS1-202ENST00000361781 OXA1LQ15070 435 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 RAET1GQ6H3X3 334 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 SERPINA13PQ6UXR4 307 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 Q6ZVU0 165 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 PLEKHM3Q6ZWE6 761 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 NPAS3Q8IXF0 933 aa13.2□□□□□ -0.3
SGMS1-202ENST00000361781 MYLIPQ8WY64 445 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms