RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 CNTRLQ7Z7A1 2325 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 SMIM31A0A1B0GVY4 71 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 EFCAB10A6NFE3 127 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 PRR23D1E9PI22 279 aaPredicted RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 PRAMEF26H0Y7S4 382 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 BCKDKO14874 412 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 COQ9O75208 318 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 PRR23D2P0DMB1 279 aaPredicted RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 HSD3B1P14060 373 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 ATP5A1P25705 553 aaKnown RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 HSD3B2P26439 372 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 IL12RB1P42701 662 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 CDK6Q00534 326 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 ID2Q02363 134 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 HHEXQ03014 270 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 DEFB134Q4QY38 66 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 RLN3Q8WXF3 142 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 MIEF2Q96C03 454 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 TOE1Q96GM8 510 aaKnown RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 REEP4Q9H6H4 257 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 AK5Q9Y6K8 562 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 C6orf47O95873 294 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 CLCN7P51798 805 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 NR1H2P55055 460 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 CLDN2P57739 230 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 ACTR3P61158 418 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 MRPS21P82921 87 aaKnown RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 Q9N2J8 555 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 MS4A12Q9NXJ0 267 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 ARPC2O15144 300 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 BCHEP06276 602 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 JMJD7P0C870 316 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 CSNK2BP67870 215 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 ABHD18Q0P651 414 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 LASP1Q14847 261 aaKnown RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 RABL3Q5HYI8 236 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 UBAP2Q5T6F2 1119 aaKnown RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 KHDRBS2Q5VWX1 349 aaKnown RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 SLC29A4Q7RTT9 530 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 MCEMP1Q8IX19 187 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 OR13J1Q8NGT2 312 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 KAT2AQ92830 837 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 TMEM74Q96NL1 305 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 ZNF347Q96SE7 839 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 TMEM30AQ9NV96 361 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 LYARQ9NX58 379 aaKnown RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 PTGFRNQ9P2B2 879 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 DNAJB9Q9UBS3 223 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 M0QX08 132 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 BTN3A3O00478 584 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 MUSKO15146 869 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 CACNG3O60359 315 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 APBB3O95704 486 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 PEX2P28328 305 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 TRAF3Q13114 568 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 SEMA3BQ13214 749 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 NXPE4Q6UWF7 544 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 SLC36A4Q6YBV0 504 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 Q6ZSR6 202 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 OR10H5Q8NGA6 315 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 OR56A1Q8NGH5 318 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 GPATCH1Q9BRR8 931 aaKnown RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 GPR39O43194 453 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 MRPS15P82914 257 aaKnown RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 GRB7Q14451 532 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 TRIM16LQ309B1 348 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 OR8H2Q8N162 312 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 SIX5Q8N196 739 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 SVOPLQ8N434 492 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 ART5Q96L15 291 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 SERHL2Q9H4I8 314 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 SERHLQ9NQF3 203 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 WASF2Q9Y6W5 498 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 PRKD3O94806 890 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 ATXN1LP0C7T5 689 aaKnown RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 SLC7A1P30825 629 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 TIA1P31483 386 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTR9-201ENST00000361367 KCNC1P48547 511 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 MRPL28Q13084 256 aaKnown RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 MED22Q15528 200 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 ARMCX4Q5H9R4 360 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 FAM91A1Q658Y4 838 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 NEK10Q6ZWH5 1172 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 THAP5Q7Z6K1 395 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 CHCHD4Q8N4Q1 142 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 METTL27Q8N6F8 245 aaPredicted RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 OR4K14Q8NGD5 310 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 ZNF671Q8TAW3 534 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 CANT1Q8WVQ1 401 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 ZNF354BQ96LW1 612 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 KCNC2Q96PR1 638 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 F2RL3Q96RI0 385 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 RBCK1Q9BYM8 510 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 PBX4Q9BYU1 374 aa13.39□□□□□ -0.27
CTR9-201ENST00000361367 OAS3Q9Y6K5 1087 aaKnown RBP13.39□□□□□ -0.27
CTR9-201ENST00000361367 MED26O95402 600 aa13.38□□□□□ -0.27
CTR9-201ENST00000361367 BCKDHAP12694 445 aa13.38□□□□□ -0.27
CTR9-201ENST00000361367 ABRAXAS2Q15018 415 aa13.38□□□□□ -0.27
CTR9-201ENST00000361367 DGUOKQ16854 277 aa13.38□□□□□ -0.27
CTR9-201ENST00000361367 SLC44A4Q53GD3 710 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms