RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 TEX13DA0A0J9YY54 714 aaPredicted RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 POU2F1P14859 743 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ARSKQ6UWY0 536 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ALDH16A1Q8IZ83 802 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 SIPA1Q96FS4 1042 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ZDHHC12Q96GR4 267 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 NUP50Q9UKX7 468 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 SCN1AP35498 2009 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 MAN2B1O00754 1011 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 DUX1O43812 170 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 ZBTB11O95625 1053 aaPredicted RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 SLC6A6P31641 620 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 EARS2Q5JPH6 523 aaKnown RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 HFE2Q6ZVN8 426 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 HDAC2Q92769 488 aaKnown RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.41□□□□□ -0.99e-7■■□□□ 14.3
CUX1-203ENST00000360264 OR5K4A6NMS3 321 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 B8ZZF3 427 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 CDKN1CP49918 316 aaPredicted RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 BDH1Q02338 343 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 OGFRL1Q5TC84 451 aaPredicted RBP9.41□□□□□ -0.9
CUX1-203ENST00000360264 LBX2Q6XYB7 198 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 CHCHD4Q8N4Q1 142 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 C16orf58Q96GQ5 468 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 UBR1Q8IWV7 1749 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 UGT1A1P22309 533 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 WASP42768 502 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 OR2L2Q8NH16 312 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 MAPK15Q8TD08 544 aa9.41□□□□□ -0.9
CUX1-203ENST00000360264 POU6F2P78424 691 aaPredicted RBP9.4□□□□□ -0.9
CUX1-203ENST00000360264 GNMTQ14749 295 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 EML3Q32P44 896 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 PAQR7Q86WK9 346 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 BANPQ8N9N5 519 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 SCGB1C1Q8TD33 95 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 ELP5Q8TE02 316 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 ASB9Q96DX5 294 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 FAM221BA6H8Z2 402 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 SOCS5O75159 536 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 EPOP01588 193 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 DGKEP52429 567 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 SLC15A3Q8IY34 581 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 RBM15BQ8NDT2 890 aaKnown RBP9.4□□□□□ -0.9
CUX1-203ENST00000360264 S100A16Q96FQ6 103 aaKnown RBP9.4□□□□□ -0.9
CUX1-203ENST00000360264 OR2M4Q96R27 311 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 SEC61A2Q9H9S3 476 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 TESMINQ9Y4I5 508 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 BCKDHAP12694 445 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 GJA8P48165 433 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 SCGB2B2Q4G0G5 96 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 C2orf27AQ580R0 203 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 LPCAT4Q643R3 524 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 EEF1DP3Q658K8 133 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 BAIAP2L2Q6UXY1 529 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 VGLL2Q8N8G2 317 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 PCDHB18PQ96TA0 734 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 TUBA1CQ9BQE3 449 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 HPF1Q9NWY4 346 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 COMMD3Q9UBI1 195 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 ZBTB22O15209 634 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 INHAP05111 366 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 HOXB2P14652 356 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 GPM6BQ13491 265 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 ZNF101Q8IZC7 436 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 STOML3Q8TAV4 291 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 KREMEN1Q96MU8 473 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 MATN1P21941 496 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 BCL2A1Q16548 175 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 WSCD2Q2TBF2 565 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 FRG2Q64ET8 278 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 TMIGD1Q6UXZ0 262 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 SEC14L1Q92503 715 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 PEX13Q92968 403 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 FRG2BQ96QU4 278 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 CYP1B1Q16678 543 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 LAS2Q8IYD9 372 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 ZDHHC14Q8IZN3 488 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 NAA11Q9BSU3 229 aaPredicted RBP9.4□□□□□ -0.9
CUX1-203ENST00000360264 SNTG1Q9NSN8 517 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 TRBV23OR9-2A0A075B6M9 112 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 TRIM64CA6NLI5 447 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 B4DGG1 531 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 GPR25O00155 361 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 HBQ1P09105 142 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 PLEKHS1Q5SXH7 462 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 CPT1BQ92523 772 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 DZANK1Q9NVP4 752 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 DNAJB4Q9UDY4 337 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 PARP4Q9UKK3 1724 aaKnown RBP9.4□□□□□ -0.9
CUX1-203ENST00000360264 SASH3O75995 380 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 UGT2B10P36537 528 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 MALLQ13021 153 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 FAM214AQ32MH5 1076 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 ZC3H14Q6PJT7 736 aaKnown RBP9.4□□□□□ -0.9
CUX1-203ENST00000360264 HMGB4Q8WW32 186 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 MAFIPQ8WZ33 124 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 KAZALD1Q96I82 304 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 CENPMQ9NSP4 180 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 CLDND1Q9NY35 253 aa9.4□□□□□ -0.9
CUX1-203ENST00000360264 CPED1A4D0V7 1026 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms