RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 TP53I13Q8NBR0 393 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 SH3KBP1Q96B97 665 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 MTERF3Q96E29 417 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 C1QTNF7Q9BXJ2 289 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 C1QTNF2Q9BXJ5 285 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 PITHD1Q9GZP4 211 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 CAAP1Q9H8G2 361 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 MYNNQ9NPC7 610 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 MBNL1Q9NR56 388 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 AHSPQ9NZD4 102 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 ZNF282Q9UDV7 671 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 RPS6KA6Q9UK32 745 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 VPS4AQ9UN37 437 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 AP1M2Q9Y6Q5 423 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 DOCK9Q9BZ29 2069 aa17.59■□□□□ 0.41
PDLIM7-203ENST00000359895 NUP214P35658 2090 aaPredicted RBP17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 G3V2T6 193 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 K7EQS6 105 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 SH3BGRLO75368 114 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 ALBP02768 609 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 TIE1P35590 1138 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 TUBA4AP68366 448 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 EPS8Q12929 822 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 NKG7Q16617 165 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 CYBRD1Q53TN4 286 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 TMEM214Q6NUQ4 689 aaKnown RBP17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 ZCCHC8Q6NZY4 707 aaKnown RBP17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 SATL1Q86VE3 508 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 FAM129CQ86XR2 697 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 ZZZ3Q8IYH5 903 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 C10orf111Q8N326 155 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 FAM131CQ96AQ9 280 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 IL17FQ96PD4 163 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 TIMM29Q9BSF4 260 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 S1PR5Q9H228 398 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 TPT1P8Q9HAU6 139 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 CHD7Q9P2D1 2997 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 SERGEFQ9UGK8 458 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 ZFR2Q9UPR6 939 aaKnown RBP17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 BTBD3Q9Y2F9 522 aa17.58■□□□□ 0.41
PDLIM7-203ENST00000359895 CHD9Q3L8U1 2897 aa17.58■□□□□ 0.4
PDLIM7-203ENST00000359895 KCNK5O95279 499 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 TGFB1P01137 390 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 ABCB1P08183 1280 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 ATP6V1B1P15313 513 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 NTSR1P30989 418 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 ADARB1P78563 741 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 SLC14A1Q13336 389 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 BIRC2Q13490 618 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 PDE7AQ13946 482 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 VEZF1Q14119 521 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 RBBP5Q15291 538 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 ANKRD26P1Q6NSI1 321 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 TTC33Q6PID6 262 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 IKBIPQ70UQ0 350 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 ARMCX6Q7L4S7 300 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 PATL1Q86TB9 770 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 STK32CQ86UX6 486 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 CLEC4FQ8N1N0 589 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 OR5K1Q8NHB7 308 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 GANCQ8TET4 914 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 SMPDL3AQ92484 453 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 AIF1LQ9BQI0 150 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 RPP25Q9BUL9 199 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 RHBGQ9H310 441 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 NT5DC2Q9H857 520 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 WASH6PQ9NQA3 447 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 TUBA8Q9NY65 449 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 USE1Q9NZ43 259 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 SH3BP4Q9P0V3 963 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 PLAGL1Q9UM63 463 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 CDH23Q9H251 3354 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 C1orf226A1L170 272 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 SOX1O00570 391 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 PLRG1O43660 514 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 DNTTP04053 509 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 ALPLP05186 524 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 SOX9P48436 509 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 SEC13P55735 322 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 VAC14Q08AM6 782 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 CNPY1Q3B7I2 92 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 OTUD3Q5T2D3 398 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 TBPL2Q6SJ96 375 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 ABRAXAS1Q6UWZ7 409 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 USP51Q70EK9 711 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 ZNF551Q7Z340 670 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 TRIML2Q8N7C3 387 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 GOT1L1Q8NHS2 421 aaPredicted RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 C16orf78Q8WTQ4 265 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 GABRG3Q99928 467 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 YTHDF1Q9BYJ9 559 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 SPNS1Q9H2V7 528 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 OR51B5Q9H339 312 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 TM7SF3Q9NS93 570 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 FBXL12Q9NXK8 326 aa17.57■□□□□ 0.4
PDLIM7-203ENST00000359895 YY2O15391 372 aa17.56■□□□□ 0.4
PDLIM7-203ENST00000359895 SEMA3DO95025 777 aa17.56■□□□□ 0.4
PDLIM7-203ENST00000359895 PAK4O96013 591 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-203ENST00000359895 FURINP09958 794 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms