RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CPA6Q8N4T0 437 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 OR4A15Q8NGL6 344 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 SPPL2AQ8TCT8 520 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 S100ZQ8WXG8 99 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 TAMM41Q96BW9 452 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 C11orf24Q96F05 449 aaPredicted RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 C7orf34Q96L11 122 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 ALPK1Q96QP1 1244 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 EPYCQ99645 322 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 CORO1BQ9BR76 489 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 SPATA9Q9BWV2 254 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 BRF2Q9HAW0 419 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 SH3BP4Q9P0V3 963 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 RAPGEFL1Q9UHV5 662 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 CORO2BQ9UQ03 480 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 PCM1Q15154 2024 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 CXorf51AA0A1B0GTR3 108 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 WBP4O75554 376 aaKnown RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 OPN1SWP03999 348 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 LCKP06239 509 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 C8AP07357 584 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 HSD3B1P14060 373 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 PPIBP23284 216 aaKnown RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 HSD3B2P26439 372 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 IMPA1P29218 277 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 PCGF2P35227 344 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 CTSCP53634 463 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 CASP9P55211 416 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 DCDC1P59894 354 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 RGNQ15493 299 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 ZNF284Q2VY69 593 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 POM121L1PQ3SYA9 428 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 CNKSR3Q6P9H4 555 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 RASGRP3Q8IV61 690 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 P3H2Q8IVL5 708 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 ENTHD1Q8IYW4 607 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 C11orf65Q8NCR3 313 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 OR7G3Q8NG95 312 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 HUS1BQ8NHY5 278 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 APH1BQ8WW43 257 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 RPL3LQ92901 407 aaKnown RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 ITFG2Q969R8 447 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 VMP1Q96GC9 406 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 KCNC2Q96PR1 638 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 CHST8Q9H2A9 424 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 BTNL2Q9UIR0 455 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 TESMINQ9Y4I5 508 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 MKI67P46013 3256 aaKnown RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 PCDH7O60245 1069 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 LEFTY1O75610 366 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 CD36P16671 472 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 TNFRSF1BP20333 461 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 TIA1P31483 386 aaKnown RBP eCLIP8.28□□□□□ -1.08
RFX3-202ENST00000358730 CRATP43155 626 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 RPS13P62277 151 aaKnown RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 DEFB103AP81534 67 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 TSTA3Q13630 321 aaPredicted RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 IQCCQ4KMZ1 466 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 SPIN4Q56A73 249 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 PAGE2BQ5JRK9 111 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 HENMT1Q5T8I9 393 aaKnown RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 ANXA8L1Q5VT79 327 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 Q6ZPB1 254 aaPredicted RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 PLD3Q8IV08 490 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 NAGSQ8N159 534 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 TRAM1L1Q8N609 369 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 DYNC2LI1Q8TCX1 351 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 IPCEF1Q8WWN9 437 aaPredicted RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 DNASE1L2Q92874 299 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 ZNF689Q96CS4 500 aaPredicted RBP8.28□□□□□ -1.08
RFX3-202ENST00000358730 ZSCAN5AQ9BUG6 496 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 GABARAPL3Q9BY60 117 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 ALOXE3Q9BYJ1 711 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 ASAH2Q9NR71 780 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.28□□□□□ -1.08
RFX3-202ENST00000358730 PCDHGA6Q9Y5G7 932 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 PMF1-BGLAPU3KQ54 211 aa8.28□□□□□ -1.08
RFX3-202ENST00000358730 OR2A25A4D2G3 310 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 QSOX1O00391 747 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 ATG13O75143 517 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 CTSAP10619 480 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 BMP4P12644 408 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 CBX3Q13185 183 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 OXA1LQ15070 435 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 TEAD4Q15561 434 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 INAQ16352 499 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 LINC00299Q6ZSB3 139 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 MFSD4AQ8N468 514 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 RASGEF1AQ8N9B8 481 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 OR4K1Q8NGD4 311 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 CYB5D2Q8WUJ1 264 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 NEIL2Q969S2 332 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 TIFAQ96CG3 184 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 METTL2AQ96IZ6 378 aaKnown RBP8.27□□□□□ -1.09
RFX3-202ENST00000358730 PKP4Q99569 1192 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 HEPHQ9BQS7 1158 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 DOHHQ9BU89 302 aa8.27□□□□□ -1.09
RFX3-202ENST00000358730 ZNF282Q9UDV7 671 aaPredicted RBP8.27□□□□□ -1.09
RFX3-202ENST00000358730 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.27□□□□□ -1.09
RFX3-202ENST00000358730 MAFFQ9ULX9 164 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms