RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TMEM88BA6NKF7 163 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 NOTOA8MTQ0 251 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 FAM227AF5H4B4 570 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SLC16A6O15403 523 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ADAM12O43184 909 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SSX4O60224 188 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 NUAK1O60285 661 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 STC2O76061 302 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 KLKB1P03952 638 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TGM1P22735 817 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PSMA1P25786 263 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SOX3P41225 446 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SLC16A1P53985 500 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TUBA1BP68363 451 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 NKX3-2P78367 333 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 OLR1P78380 273 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 NCF4Q15080 339 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PROX2Q3B8N5 592 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 IQCCQ4KMZ1 466 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 GCNT6Q5T4J0 391 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 NEK5Q6P3R8 708 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TUBA1AQ71U36 451 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 DDX53Q86TM3 631 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 DBF4BQ8NFT6 615 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 AUTS2Q8WXX7 1259 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 MYLIPQ8WY64 445 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 FCGR1BQ92637 280 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PPCDCQ96CD2 204 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ART5Q96L15 291 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 COL21A1Q96P44 957 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TRIB3Q96RU7 358 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 FAM129BQ96TA1 746 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PHOX2BQ99453 314 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SLC35A5Q9BS91 424 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.35□□□□□ -1.399e-6■■□□□ 13.2
CSDE1-203ENST00000358528 HDHD2Q9H0R4 259 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 OR51B5Q9H339 312 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 MAGIXQ9H6Y5 334 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TRPS1Q9UHF7 1281 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SSR3Q9UNL2 185 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 UGT2A1Q9Y4X1 527 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 A0A0G2JN53 185 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 LZTS3O60299 673 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PSIP1O75475 530 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 DNAJB5O75953 348 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CCNB2O95067 398 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CDRT1O95170 752 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 C6orf47O95873 294 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 PCMT1P22061 227 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 EIF2DP41214 584 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CASP3P42574 277 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 BDKRB1P46663 353 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SLC11A1P49279 550 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 RACK1P63244 317 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SCARB2Q14108 478 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 NDUFA5Q16718 116 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 RNASE12Q5GAN4 147 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 LDLRAD1Q5T700 205 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 C1QTNF12Q5T7M4 302 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SYT6Q5T7P8 510 aaPredicted RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 NRARPQ7Z6K4 114 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ZSWIM9Q86XI8 627 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TRAPPC5Q8IUR0 188 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF366Q8N895 744 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 GGHQ92820 318 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CLP1Q92989 425 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 ISG20Q96AZ6 181 aaKnown RBP6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CMTM7Q96FZ5 175 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CCDC115Q96NT0 180 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 OR5M11Q96RB7 305 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 CPNE5Q9HCH3 593 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 RLIMQ9NVW2 624 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 SIRT5Q9NXA8 310 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 TAS2R9Q9NYW1 312 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 MOSPD1Q9UJG1 213 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 LYVE1Q9Y5Y7 322 aa6.35□□□□□ -1.39
CSDE1-203ENST00000358528 IGLV3-10A0A075B6K4 115 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 OR6C70A6NIJ9 312 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 WWP2O00308 870 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 GFRA2O00451 464 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 PCDH7O60245 1069 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 OAZ2O95190 189 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 WISP3O95389 354 aaPredicted RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 CATP04040 527 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ITGAMP11215 1152 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 PRKAR2AP13861 404 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ACRV1P26436 265 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 GSTM5P46439 218 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 RPS13P62277 151 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 TCEA2Q15560 299 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF181Q2M3W8 571 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 LIPKQ5VXJ0 399 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 HIST2H2AA3Q6FI13 130 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 SYCE2Q6PIF2 218 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 NCEH1Q6PIU2 408 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 USP30Q70CQ3 517 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 TAS1R1Q7RTX1 841 aa6.34□□□□□ -1.39
CSDE1-203ENST00000358528 MEX3DQ86XN8 651 aaKnown RBP6.34□□□□□ -1.39
CSDE1-203ENST00000358528 RNF130Q86XS8 419 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms