RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 C3orf49Q96BT1 292 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 MAP3K3Q99759 626 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 ORAI3Q9BRQ5 295 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 TRPV5Q9NQA5 729 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 MTRRQ9UBK8 725 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 ZNF451Q9Y4E5 1061 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 ANKRD66B4E2M5 251 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 GPR39O43194 453 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 TLX2O43763 284 aaPredicted RBP7.13□□□□□ -1.27
VPS13A-202ENST00000357409 RPS26P62854 115 aaKnown RBP7.13□□□□□ -1.27
VPS13A-202ENST00000357409 TMEM236Q5W0B7 351 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 SYT14Q8NB59 555 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 OR8H1Q8NGG4 311 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 USB1Q9BQ65 265 aaKnown RBP7.13□□□□□ -1.27
VPS13A-202ENST00000357409 RHOJQ9H4E5 214 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 PRDM8Q9NQV8 689 aa7.13□□□□□ -1.27
VPS13A-202ENST00000357409 PTRH2Q9Y3E5 179 aaKnown RBP7.13□□□□□ -1.27
VPS13A-202ENST00000357409 WWP2O00308 870 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 CHRM1P11229 460 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 CD97P48960 835 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 MAT1AQ00266 395 aaKnown RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 HHEXQ03014 270 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 SOX4Q06945 474 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ST3GAL4Q11206 333 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ZMYND11Q15326 602 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 SPATA19Q7Z5L4 167 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 SMOQ99835 787 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 CDH22Q9UJ99 828 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ANXA2P2A6NMY6 339 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 CXCR6O00574 342 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ALOX15BO15296 676 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ADORA3P0DMS8 318 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ACVR1BP36896 505 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 RPS9P46781 194 aaKnown RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ARRB1P49407 418 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 OR4D2P58180 307 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 C3orf38Q5JPI3 329 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 OGFRL1Q5TC84 451 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ERICH5Q6P6B1 374 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 GALNT18Q6P9A2 607 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 LRRC55Q6ZSA7 311 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ZNF557Q8N988 423 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ZSCAN1Q8NBB4 408 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 OR14L1PQ8NHC6 308 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 RFT1Q96AA3 541 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 FLRT1Q9NZU1 646 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 UNC13BO14795 1591 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 H0YGN5 161 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 RPLP2P05387 115 aaKnown RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 HAPLN1P10915 354 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 CCR8P51685 355 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 SLC18A1P54219 525 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 WSCD2Q2TBF2 565 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 PDCD4Q53EL6 469 aaKnown RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 SPNS2Q8IVW8 549 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ZNF384Q8TF68 577 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 HPF1Q9NWY4 346 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ZDHHC3Q9NYG2 299 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 IRAK3Q9Y616 596 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 HECW2Q9P2P5 1572 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 MAP4K2Q12851 820 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 RASGEF1CQ8N431 466 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 RCBTB1Q8NDN9 531 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ACAD8Q9UKU7 415 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 BIRC5O15392 142 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 G6PDP11413 515 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 NR0B2Q15466 257 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ADGRF1Q5T601 910 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 OR5M1Q8NGP8 315 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 PELOQ9BRX2 385 aaKnown RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 MAN2C1Q9NTJ4 1040 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 MEX3AA1L020 520 aaKnown RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 C2CD4BA6NLJ0 364 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 RIIAD1A6NNX1 92 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 L7N2F9 121 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 TSPAN6O43657 245 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 UBXN7O94888 489 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 LIPCP11150 499 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 VAMP1P23763 118 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 DSTNP60981 165 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ATP6V0D1P61421 351 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 VAMP2P63027 116 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 GHRHRQ02643 423 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 BROXQ5VW32 411 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 TMC8Q8IU68 726 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 IRF2BP1Q8IU81 584 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 BOCQ9BWV1 1114 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 CCNB1IP1Q9NPC3 277 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 A0A0U1RQK1 487 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 THEGLP0DJG4 465 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 RPS6KA3P51812 740 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 DEFA5Q01523 94 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ITPRIPL2Q3MIP1 535 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 MARCH9Q86YJ5 346 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 ELMOD2Q8IZ81 293 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 PIAS4Q8N2W9 510 aaPredicted RBP7.12□□□□□ -1.27
VPS13A-202ENST00000357409 TMEM41AQ96HV5 264 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 TTYH3Q9C0H2 523 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 LRRC19Q9H756 370 aa7.12□□□□□ -1.27
VPS13A-202ENST00000357409 PPCSQ9HAB8 311 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms