RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 LMO2P25791 158 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 HSD3B2P26439 372 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CLCNKAP51800 687 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ST3GAL4Q11206 333 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 IRF5Q13568 498 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 RIN1Q13671 783 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 MPP2Q14168 576 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ELOAQ14241 798 aaKnown RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 ELOCQ15369 112 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TIGD5Q53EQ6 642 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 PLEKHS1Q5SXH7 462 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 GDF6Q6KF10 455 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 TREML1Q86YW5 311 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ERI1Q8IV48 349 aaKnown RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 CMTR2Q8IYT2 770 aaKnown RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 SLCO2A1Q92959 643 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 EMID1Q96A84 441 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 NECAB3Q96P71 396 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 NTPCRQ9BSD7 190 aaKnown RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 TM9SF3Q9HD45 589 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 MKS1Q9NXB0 559 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 LAMP5Q9UJQ1 280 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 GMEB2Q9UKD1 530 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ACSL5Q9ULC5 683 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 PCDHB3Q9Y5E6 796 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZNF536O15090 1300 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 IGLV3-22A0A075B6J6 115 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SH3D21A4FU49 640 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TRAPPC6AO75865 159 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 PRKD3O94806 890 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 APOL3O95236 402 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 IFNA2P01563 188 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZNF806P0C7X5 589 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 GKN3PP0CG01 181 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CHRNB2P17787 502 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 GSTM4Q03013 218 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ABHD18Q0P651 414 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 FUT2Q10981 343 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TRAM2Q15035 370 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SLC36A3Q495N2 470 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZBED5Q49AG3 693 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CLEC12AQ5QGZ9 265 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 GLT8D1Q68CQ7 371 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 NCBP2-AS2Q69YL0 99 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 RAB12Q6IQ22 244 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 DCDC5Q6ZRR9 648 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 GOLGA7Q7Z5G4 137 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 NFKBIDQ8NI38 313 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 BPIFB1Q8TDL5 484 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ELP5Q8TE02 316 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ADAMTS18Q8TE60 1221 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CLEC4DQ8WXI8 215 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 AURKBQ96GD4 344 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZDHHC12Q96GR4 267 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CDKN2AIPNLQ96HQ2 116 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 KCNC2Q96PR1 638 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 TM9SF2Q99805 663 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 ZNF700Q9H0M5 742 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 OR10A4Q9H209 315 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 CERS4Q9HA82 394 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 RABL2AQ9UBK7 228 aaPredicted RBP6.28□□□□□ -1.4
UPF2-201ENST00000356352 GNG8Q9UK08 70 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 RABL2BQ9UNT1 228 aa6.28□□□□□ -1.4
UPF2-201ENST00000356352 SLIT2O94813 1529 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 A0A0G2JPF8 293 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 KLRG2A4D1S0 409 aaPredicted RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 A8MT66 165 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 A8MUI8 341 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 HNRNPCL3B7ZW38 293 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 HSPA12AO43301 675 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 MT-ND1P03886 318 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 MT-ND2P03891 347 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 HNRNPCL4P0DMR1 293 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PFKLP17858 780 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 CHRNA6Q15825 494 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 RNF220Q5VTB9 566 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 XKRXQ6PP77 449 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 PAQR3Q6TCH7 311 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 C3P1Q6ZMU1 363 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 TMEM126BQ8IUX1 230 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 NPAS3Q8IXF0 933 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 KCT2Q8NC54 265 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 FAM46DQ8NEK8 389 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 OR13C4Q8NGS5 318 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 OR9A1PQ8NGU1 263 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 LMX1AQ8TE12 382 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 THEM6Q8WUY1 208 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 KLK6Q92876 244 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 IRF7Q92985 503 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 RHBDF1Q96CC6 855 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 APOBEC3GQ9HC16 384 aaKnown RBP6.27□□□□□ -1.41
UPF2-201ENST00000356352 CLDND1Q9NY35 253 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 ABCG2Q9UNQ0 655 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 COQ4Q9Y3A0 265 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 A8MUA0 341 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 C2orf74A8MZ97 194 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 B8ZZF3 427 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 EI24O14681 340 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 AOC2O75106 756 aa6.27□□□□□ -1.41
UPF2-201ENST00000356352 RPL17P18621 184 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms