RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CENPXA8MT69 81 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PCDH17O14917 1159 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 GPX5O75715 221 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ANXA5P08758 320 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 HLA-EP13747 358 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ETFAP13804 333 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 TYMPP19971 482 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 HOXD11P31277 338 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 GGT2P36268 569 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 UGT2B10P36537 528 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 GAB1Q13480 694 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 TSTA3Q13630 321 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 TBCEQ15813 527 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 DUOXA1Q1HG43 343 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 HKDC1Q2TB90 917 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 IQCCQ4KMZ1 466 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 CCDC58Q4VC31 144 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 CLLU1OSQ5K130 101 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 UBE2R2Q712K3 238 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 NLRP8Q86W28 1048 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ZSWIM9Q86XI8 627 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 RBFAQ8N0V3 343 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 LGI4Q8N135 537 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ASCC1Q8N9N2 400 aaKnown RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 OR5AK3PQ8NH89 298 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 TRMT61AQ96FX7 289 aaKnown RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 OR2A14Q96R47 310 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PITX2Q99697 317 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ERVW-1Q9UQF0 538 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 LYVE1Q9Y5Y7 322 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 CFAP20Q9Y6A4 193 aaKnown RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 COL4A4P53420 1690 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 XIRP2A4UGR9 3374 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 SOX14O95416 240 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 BPIP17213 487 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PTPN2P17706 415 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 HMGCLP35914 325 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 RFX2P48378 723 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PRKCDQ05655 676 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 GPRC6AQ5T6X5 926 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 NCEH1Q6PIU2 408 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PRSS55Q6UWB4 352 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 GLB1LQ6UWU2 654 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF517Q6ZMY9 492 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ABI3BPQ7Z7G0 1075 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 SERPINA11Q86U17 422 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 GLCCI1Q86VQ1 547 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 STK40Q8N2I9 435 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 CADM2Q8N3J6 435 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 TP53I13Q8NBR0 393 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 WFDC5Q8TCV5 224 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 TMEM203Q969S6 136 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ST6GAL2Q96JF0 529 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 CITED4Q96RK1 184 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 SLC30A2Q9BRI3 323 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 MOV10Q9HCE1 1003 aaKnown RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 C11orf16Q9NQ32 467 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 NDUFAF4Q9P032 175 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 CD84Q9UIB8 345 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 KLHL20Q9Y2M5 609 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PCDHB1Q9Y5F3 818 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 MTMR11A4FU01 709 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PRAMEF25A6NGN4 478 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ZNF623O75123 536 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 GCM2O75603 506 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 VNN2O95498 520 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 AMD1P17707 334 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 CCR7P32248 378 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 ATP5C1P36542 298 aaKnown RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 RPS19P39019 145 aaKnown RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 SLC11A2P49281 568 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 CDH4P55283 916 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 CHIT1Q13231 466 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PAQR6Q6TCH4 344 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 RTN4RL1Q86UN2 441 aaPredicted RBP9.78□□□□□ -0.84
PTPRA-203ENST00000356147 UBQLNLQ8IYU4 475 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 YME1L1Q96TA2 773 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 TCF25Q9BQ70 676 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 BARHL1Q9BZE3 327 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 SLC32A1Q9H598 525 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 PEX16Q9Y5Y5 336 aa9.78□□□□□ -0.84
PTPRA-203ENST00000356147 TMEM229AB2RXF0 380 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 SAP18O00422 153 aaKnown RBP9.77□□□□□ -0.85
PTPRA-203ENST00000356147 ADAM12O43184 909 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 SCN2BO60939 215 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 AOC2O75106 756 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 OAZ2O95190 189 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 APOL3O95236 402 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 SEMG1P04279 462 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 ITGALP20701 1170 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 HNF1BP35680 557 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 SOX6P35712 828 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 SSX1Q16384 188 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 FAM110CQ1W6H9 321 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 SERPINA13PQ6UXR4 307 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 WDR53Q7Z5U6 358 aaPredicted RBP9.77□□□□□ -0.85
PTPRA-203ENST00000356147 BBS7Q8IWZ6 715 aa9.77□□□□□ -0.85
PTPRA-203ENST00000356147 COQ8BQ96D53 544 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms