RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 BRINP1O60477 761 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 CPNE3O75131 537 aaKnown RBP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 SNUPNO95149 360 aaKnown RBP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ESRRBO95718 433 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 TSPAN8P19075 237 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 GRK2P25098 689 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 SLC5A2P31639 672 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 WDR4P57081 412 aaKnown RBP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 PPP2R2AP63151 447 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 RGS1Q08116 209 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 PRTGQ2VWP7 1150 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 GARNL3Q5VVW2 1013 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 VN1R4Q7Z5H5 301 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ANKRD53Q8N9V6 530 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 OR7G3Q8NG95 312 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 MGARPQ8TDB4 240 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 MOCOSQ96EN8 888 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ACTR5Q9H9F9 607 aaPredicted RBP14.84□□□□□ -0.03
TRIM13-201ENST00000356017 MLXIPLQ9NP71 852 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 MID1IP1Q9NPA3 183 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ACSS2Q9NR19 701 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 ACSL6Q9UKU0 697 aa14.84□□□□□ -0.03
TRIM13-201ENST00000356017 MED19A0JLT2 244 aaPredicted RBP14.83□□□□□ -0.04
TRIM13-201ENST00000356017 URADA6NGE7 173 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 PPP6CO00743 305 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 CLEC3AO75596 197 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 SNRNP200O75643 2136 aaKnown RBP14.83□□□□□ -0.04
TRIM13-201ENST00000356017 SERPINE1P05121 402 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 ENO1P06733 434 aaKnown RBP14.83□□□□□ -0.04
TRIM13-201ENST00000356017 SERPINA6P08185 405 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 PIK3CBP42338 1070 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 PHEXP78562 749 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 CHI3L2Q15782 390 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 NDUFA9Q16795 377 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 MUM1Q2TAK8 710 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 TTC19Q6DKK2 380 aaPredicted RBP14.83□□□□□ -0.04
TRIM13-201ENST00000356017 RHBDD2Q6NTF9 364 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 LETMD1Q6P1Q0 360 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 TRIM42Q8IWZ5 723 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.83□□□□□ -0.048e-7■■■□□ 16.3
TRIM13-201ENST00000356017 OR6Y1Q8NGX8 325 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 NT5CQ8TCD5 201 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 PMEPA1Q969W9 287 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 LRFN5Q96NI6 719 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 PRM3Q9NNZ6 103 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 TXLNGQ9NUQ3 528 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 SNX6Q9UNH7 406 aa14.83□□□□□ -0.04
TRIM13-201ENST00000356017 TMEM184BQ9Y519 407 aaPredicted RBP14.83□□□□□ -0.04
TRIM13-201ENST00000356017 HYKKA2RU49 373 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 STMND1H3BQB6 276 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 STK17BO94768 372 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 KIAA0754O94854 1291 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 OR4F21O95013 312 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 TIAF1O95411 115 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 SERPIND1P05546 499 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 CTSBP07858 339 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 PCNAP12004 261 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 IFT88Q13099 833 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 RCN2Q14257 317 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 ZRSR2Q15696 482 aaKnown RBP14.82□□□□□ -0.04
TRIM13-201ENST00000356017 HKDC1Q2TB90 917 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 TBC1D25Q3MII6 688 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 FRG2Q64ET8 278 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 ZCCHC23Q6ZST2 131 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 SYVN1Q86TM6 617 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 RAB3IL1Q8TBN0 382 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 METTL6Q8TCB7 284 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 AGAP11Q8TF27 550 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 CLIP3Q96DZ5 547 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 FRG2BQ96QU4 278 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 SLC29A3Q9BZD2 475 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 ELOVL6Q9H5J4 265 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 SYNPO2LQ9H987 977 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 STARD5Q9NSY2 213 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 CUTCQ9NTM9 273 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 FOXJ2Q9P0K8 574 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 DKK4Q9UBT3 224 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 ZNF225Q9UK10 706 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 RUVBL1Q9Y265 456 aaKnown RBP14.82□□□□□ -0.04
TRIM13-201ENST00000356017 ADAMTS20P59510 1910 aa14.82□□□□□ -0.04
TRIM13-201ENST00000356017 A0A1B0GTL3 188 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 TMEM114B3SHH9 223 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.81□□□□□ -0.04
TRIM13-201ENST00000356017 UBFD1O14562 309 aaKnown RBP14.81□□□□□ -0.04
TRIM13-201ENST00000356017 CRCPO75575 148 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 KRT6AP02538 564 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 KRT6BP04259 564 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 NTRK1P04629 796 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 KLK3P07288 261 aaPredicted RBP14.81□□□□□ -0.04
TRIM13-201ENST00000356017 NR1D1P20393 614 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 HMOX2P30519 316 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 KRT6CP48668 564 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 STXBP1P61764 594 aaKnown RBP14.81□□□□□ -0.04
TRIM13-201ENST00000356017 CYP4F2P78329 520 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 ZNF33BQ06732 778 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 FAM53BQ14153 422 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 ARL13AQ5H913 290 aaPredicted RBP14.81□□□□□ -0.04
TRIM13-201ENST00000356017 ARFGAP2Q8N6H7 521 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 CDYL2Q8N8U2 506 aa14.81□□□□□ -0.04
TRIM13-201ENST00000356017 HUS1BQ8NHY5 278 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms