RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SRSF11Q05519 484 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 HYAL2Q12891 473 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 EFTUD2Q15029 972 aaKnown RBP eCLIP15.82■□□□□ 0.127e-13■■■□□ 19.1
PDLIM7-201ENST00000355572 TSNQ15631 228 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 PRAMEF9Q5VWM5 478 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 CAPN13Q6MZZ7 669 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 ATCAYQ86WG3 371 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 HPS6Q86YV9 775 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 FAM26EQ8N5C1 309 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 SIRT6Q8N6T7 355 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 EFCAB3Q8N7B9 438 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 ANKRD53Q8N9V6 530 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 BRIX1Q8TDN6 353 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 IMMP1LQ96LU5 166 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 RHOJQ9H4E5 214 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 PLA2G3Q9NZ20 509 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 WHRNQ9P202 907 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 RNF14Q9UBS8 474 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 G3BP2Q9UN86 482 aaKnown RBP15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 CROCCQ5TZA2 2017 aa15.82■□□□□ 0.12
PDLIM7-201ENST00000355572 TCRBV9S1A1TA0A576 114 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 BLACEA4D250 179 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 TAPBPO15533 448 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 VPS4BO75351 444 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 HEXBP07686 556 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 ANXA5P08758 320 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 VARSP26640 1264 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 AP1S2P56377 157 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 ETF1P62495 437 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 NR6A1Q15406 480 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 THOC6Q86W42 341 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 PALM2Q8IXS6 379 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 ZADH2Q8N4Q0 377 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 OR51Q1Q8NH59 317 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 SLC13A3Q8WWT9 602 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 PSMG3-AS1Q96PY0 264 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 BARD1Q99728 777 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 WDR77Q9BQA1 342 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 TMEM79Q9BSE2 394 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 SARGQ9BW04 601 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 PCBD2Q9H0N5 130 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 KLHL31Q9H511 634 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 LANCL2Q9NS86 450 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 C14orf105Q9NVL8 296 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 PTGFRNQ9P2B2 879 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 MAP10Q9P2G4 905 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 VPS4AQ9UN37 437 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 SLC22A14Q9Y267 594 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 NAALAD2Q9Y3Q0 740 aa15.81■□□□□ 0.12
PDLIM7-201ENST00000355572 NBPF19A0A087WUL8 3843 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 NSG1A0A0A6YYJ2 146 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 FAM159BA6NKW6 160 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 H0YIG0 161 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 OR1F1O43749 312 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 CBX6O95503 412 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 ALPPP05187 535 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 HIST1H2AGP0C0S8 130 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 HIST1H2ADP20671 130 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 HRH2P25021 359 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 CASQ1P31415 396 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 XCR1P46094 333 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 GLRBP48167 497 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 REEP5Q00765 189 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 AGAP7PQ5VUJ5 663 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 ADNP2Q6IQ32 1131 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 NDUFAF7Q7L592 441 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 IQCKQ8N0W5 287 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 AFAP1L2Q8N4X5 818 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 CAMKVQ8NCB2 501 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 GABPB2Q8TAK5 448 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 FBXO25Q8TCJ0 367 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 PPP4R1Q8TF05 950 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 PYROXD1Q8WU10 500 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 SLC5A11Q8WWX8 675 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 TSLPQ969D9 159 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 ESAMQ96AP7 390 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 THAP11Q96EK4 314 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 PEX11GQ96HA9 241 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 HIST1H2AHQ96KK5 128 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 AGAP4Q96P64 663 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 HIST1H2AJQ99878 128 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 H2AFJQ9BTM1 129 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 ILKAPQ9H0C8 392 aaPredicted RBP15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 ZNF700Q9H0M5 742 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 ASB1Q9Y576 335 aa15.8■□□□□ 0.12
PDLIM7-201ENST00000355572 SVILO95425 2214 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 TRBC2A0A5B9 178 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 ESYT3A0FGR9 886 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 E2F3O00716 465 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 TXNDC9O14530 226 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 PRPF4O43172 522 aaKnown RBP eCLIP15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 NDUFS4O43181 175 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 CDC123O75794 336 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 IPO13O94829 963 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 SEC24DO94855 1032 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 TBX6O95947 436 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 ENO2P09104 434 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 CCND1P24385 295 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 SCTRP47872 440 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms