RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CDX1P47902 265 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PDE1BQ01064 536 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ABRQ12979 859 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GPS2Q13227 327 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GAMTQ14353 236 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SQLEQ14534 574 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 DAZAP2Q15038 168 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 FASTKD1Q53R41 847 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF542PQ5EBM4 170 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 HERC4Q5GLZ8 1057 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 NDUFAF5Q5TEU4 345 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 LRRC38Q5VT99 294 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 C17orf107Q6ZR85 190 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 COMMD2Q86X83 199 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF573Q86YE8 665 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 EID3Q8N140 333 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 FAM98AQ8NCA5 519 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SLC44A5Q8NCS7 719 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GPRC5AQ8NFJ5 357 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 OR52B4Q8NGK2 314 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 OR52M1Q8NGK5 317 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 METTL21AQ8WXB1 218 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ALG14Q96F25 216 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 BICD1Q96G01 975 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 C4orf36Q96KX1 117 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PRMT1Q99873 361 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SPRTNQ9H040 489 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM245Q9H330 911 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 DCLRE1BQ9H816 532 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CENPMQ9NSP4 180 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PANK4Q9NVE7 773 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 LEF1Q9UJU2 399 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 NAALAD2Q9Y3Q0 740 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 KIAA1217Q5T5P2 1943 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TAF1P21675 1872 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ADGRB2O60241 1585 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 C13orf42A0A1B0GVH6 325 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SLC15A5A6NIM6 579 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ZSCAN5BA6NJL1 495 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 WASHC1A8K0Z3 465 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 WASH3PC4AMC7 463 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 F8WDY8 70 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 BOLA2-SMG1P6H3BVE0 249 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 AKAP8O43823 692 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ADCY5O95622 1261 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PCCBP05166 539 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ODC1P11926 461 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 HOXB2P14652 356 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 EPCAMP16422 314 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 DLSTP36957 453 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CLCNKAP51800 687 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 NR0B1P51843 470 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CNTN2Q02246 1040 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 RELQ04864 619 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 CHIT1Q13231 466 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 AMZ1Q400G9 498 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 HSP90AA5PQ58FG0 334 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SLC18B1Q6NT16 456 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 NEK5Q6P3R8 708 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GFRALQ6UXV0 394 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 WASH2PQ6VEQ5 465 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SIAH3Q8IW03 269 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 LGI2Q8N0V4 545 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 RASGEF1AQ8N9B8 481 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 BICD2Q8TD16 824 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 THRSPQ92748 146 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 HAS2Q92819 552 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PHF21AQ96BD5 680 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF333Q96JL9 665 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TRMOQ9BU70 441 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TOR3AQ9H497 397 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 C5orf66Q9H5L9 145 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 EVA1AQ9H8M9 152 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 RAB18Q9NP72 206 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GKN1Q9NS71 199 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 HMG20BQ9P0W2 317 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PACSIN3Q9UKS6 424 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 DMRT1Q9Y5R6 373 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ZHX2Q9Y6X8 837 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 NCANO14594 1321 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TMEM129A0AVI4 362 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 EME2A4GXA9 379 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 ANTXRLA6NF34 631 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 E9PI62 339 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 AP3B1O00203 1094 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 HSF2BPO75031 334 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 LATS1O95835 1130 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 DRD5P21918 477 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 EEF1B2P24534 225 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 DNAJB1P25685 340 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SULT1E1P49888 294 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 HUNKP57058 714 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 GHRHRQ02643 423 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 PPP1R8Q12972 351 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 LCP2Q13094 533 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 SNTB2Q13425 540 aaKnown RBP1.52□□□□□ -2.17
BRCA1-202ENST00000354071 TRIM29Q14134 588 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 FNBP1LQ5T0N5 605 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 KLHL10Q6JEL2 608 aa1.52□□□□□ -2.17
BRCA1-202ENST00000354071 FAM171BQ6P995 826 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms